Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038738 | Potato | cytosol | 63.86 | 43.8 |
| HORVU1Hr1G053910.1 | Barley | cytosol | 18.07 | 41.67 |
| GSMUA_Achr1P13460_001 | Banana | cytosol | 44.58 | 26.06 |
| CDY21081 | Canola | extracellular | 68.67 | 20.8 |
| CDY34594 | Canola | cytosol | 68.67 | 20.8 |
| CDY26610 | Canola | cytosol | 68.67 | 20.8 |
| CDY16054 | Canola | extracellular | 68.67 | 20.8 |
| CDX98014 | Canola | extracellular | 68.67 | 20.8 |
| CDY19402 | Canola | cytosol | 67.47 | 20.44 |
| Os06t0153800-01 | Rice | plasma membrane, plastid | 51.81 | 15.52 |
| EER89220 | Sorghum | cytosol | 49.4 | 14.64 |
| TraesCS7B01G008100.1 | Wheat | golgi, unclear | 48.19 | 14.34 |
| TraesCS7D01G105500.1 | Wheat | cytosol | 48.19 | 14.34 |
| Zm00001d045315_P003 | Maize | cytosol | 48.19 | 13.84 |
| TraesCS7A01G110200.1 | Wheat | cytosol | 42.17 | 12.54 |
| CDY34146 | Canola | cytosol | 21.69 | 6.59 |
| CDX83694 | Canola | golgi | 21.69 | 5.44 |
| CDX83281 | Canola | extracellular | 8.43 | 5.22 |
| CDY03969 | Canola | extracellular | 20.48 | 5.18 |
| CDY28254 | Canola | cytosol | 14.46 | 5.15 |
| CDY36450 | Canola | cytosol | 14.46 | 5.15 |
| CDX68732 | Canola | cytosol | 14.46 | 5.15 |
| CDY23291 | Canola | cytosol | 14.46 | 5.15 |
| CDY13421 | Canola | cytosol | 14.46 | 5.15 |
| CDX72300 | Canola | cytosol | 14.46 | 5.15 |
| CDY13711 | Canola | cytosol | 21.69 | 3.43 |
| Solyc03g063420.1.1 | Tomato | mitochondrion | 4.82 | 2.09 |
Protein Annotations
| EnsemblPlants:CDY70092 | EnsemblPlantsGene:GSBRNA2T00096298001 | Gene3D:3.60.20.10 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF63 | ProteinID:CDY70092 | ProteinID:CDY70092.1 | SEG:seg | SUPFAM:SSF56235 | UniParc:UPI0004EF4D1C |
| UniProt:A0A078JWW6 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng66660DBnaCnng66660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWW6]
Coordinates
chrLK041123:-:1701..2036
Molecular Weight (calculated)
9147.5 Da
IEP (calculated)
4.567
GRAVY (calculated)
0.349
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MGFLLCPPLP FPLTTDFDGF QKEAVQMVKP AKGTTTLAFI FKEGVMVDAD SMKKIIEINP YMLGPMAGGL EDYILKSILF SLN
001: MKLDTSGLET TMPVIGFGSN SEMLDGFSSA PSFDLPRTTD FDGFQKKAVE MVKPAKGTTT LAFIFKEGVM VAADSRASMG GYISSQSVKK IIEINPYMLG
101: TMAGGAADCQ FWHRNLGIKC RLHELANKRR ISVSGASKLL ANMLYSYRGM GLSVGTMIAG WDETGPGLYY VDNEGGRLKG DRFSVGSGSP YAYGVLDSGY
201: KFDMSVEEAS ELARRSIYHA TFRDGASGGV ASVYHVGPQG WTKLSGDDVG ELHYHYYPVA PITAEHVMEE AAE
101: TMAGGAADCQ FWHRNLGIKC RLHELANKRR ISVSGASKLL ANMLYSYRGM GLSVGTMIAG WDETGPGLYY VDNEGGRLKG DRFSVGSGSP YAYGVLDSGY
201: KFDMSVEEAS ELARRSIYHA TFRDGASGGV ASVYHVGPQG WTKLSGDDVG ELHYHYYPVA PITAEHVMEE AAE
Arabidopsis Description
PBE2Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178VFG8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.