Factsheet for HORVU1Hr1G090810.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G413900.1	Wheat	cytosol, golgi	98.77	98.77
TraesCS1B01G443900.1	Wheat	cytosol	98.36	98.36
TraesCS1D01G421300.1	Wheat	cytosol	97.95	97.95
HORVU7Hr1G018660.1	Barley	cytosol	95.08	94.31
Os06t0139900-01	Rice	cytosol, plasma membrane, plastid	87.3	86.59
Os02t0770000-01	Rice	cytosol	84.84	84.15
Zm00001d036108_P001	Maize	cytosol	85.25	83.87
Zm00001d045403_P001	Maize	cytosol	84.84	83.81
EER89160	Sorghum	cytosol	83.61	83.27
EES14124	Sorghum	cytosol	83.2	82.86
GSMUA_Achr7P15820_001	Banana	cytosol	73.36	79.91
VIT_11s0065g00320.t01	Wine grape	cytosol	74.18	78.02
GSMUA_Achr5P24110_001	Banana	cytosol	73.77	77.25
VIT_04s0008g02850.t01	Wine grape	cytosol	70.49	77.13
KRH52623	Soybean	cytosol, nucleus	72.95	76.39
KRH61963	Soybean	endoplasmic reticulum	72.54	75.97
CDY36450	Canola	cytosol	72.13	75.54
Bra011257.1-P	Field mustard	cytosol	72.13	75.54
PGSC0003DMT400025311	Potato	cytosol	72.95	75.42
CDY13421	Canola	cytosol	71.72	75.11
Bra010243.1-P	Field mustard	cytosol	71.72	75.11
Bra024015.1-P	Field mustard	cytosol	71.72	75.11
CDX68732	Canola	cytosol	71.72	75.11
CDY28254	Canola	cytosol	71.72	75.11
CDY23291	Canola	cytosol	71.72	75.11
CDX72300	Canola	cytosol	71.31	74.68
PGSC0003DMT400035591	Potato	cytosol	72.13	74.58
Solyc07g016200.2.1	Tomato	extracellular, plastid	72.13	74.58
AT4G31300.2	Thale cress	cytosol	69.67	72.65
PGSC0003DMT400051560	Potato	cytosol	24.59	46.88
HORVU5Hr1G110330.1	Barley	cytosol	25.82	22.58
HORVU1Hr1G028190.1	Barley	plastid	25.82	19.87
HORVU7Hr1G022970.1	Barley	plastid	26.64	19.23
HORVU1Hr1G053910.1	Barley	cytosol	2.46	16.67

Protein Annotations

MapMan:19.2.6.1.2.1	Gene3D:3.60.20.10	EMBL:AK359378	UniProt:F2D668	GO:GO:0000502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603
EnsemblPlantsGene:HORVU1Hr1G090810	EnsemblPlants:HORVU1Hr1G090810.1	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227
PRINTS:PR00141	ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF102	InterPro:Pept_T1A_subB
InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	MEROPS:T01.010	UniParc:UPI00020056C1
SEG:seg	:	:	:	:	:

Description

Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:F2D668]

Coordinates

chrchr1H:-:547109896..547113915

Molecular Weight (calculated)

26137.1 Da

IEP (calculated)

5.269

GRAVY (calculated)

-0.088

Length

244 amino acids

Sequence
(BLAST)

001: MDAASLMGPS SADAPTDGEH RMGTTIVGVC YDGGVVLAAD SRTSTGMYVA NRASDKISQL TDNVYVCRSG SAADTQIISD YVRYFLHQHT IQLGQPATVK
101: VASNLVRLLA YQNKSMLQAG MIVGGWDKYE GGQIYSVPLG GTILRQPFAI GGSGSSYLYG LMDHEWKEGM TQEEAEKFVV KVVSLAIARD GASGGVVRTV
201: TINEEGVKRS FHPGDILPLW HEEMKPQNSL LDILAAGSSD AMVQ

Best Arabidopsis Sequence Match ( AT4G31300.3 )
(BLAST)

001: MDLNLDAPHS MGTTIIGVTY NGGVVLGADS RTSTGMYVAN RASDKITQLT DNVYVCRSGS AADSQVVSDY VRYFLHQHTI QHGQPATVKV SANLIRMLAY
101: NNKNMLQTGL IVGGWDKYEG GKIYGIPLGG TVVEQPFAIG GSGSSYLYGF FDQAWKDNMT KEEAEQLVVK AVSLAIARDG ASGGVVRTVI INSEGVTRNF
201: YPGDKLQLWH EELEPQNSLL DILNAAGPEP MAM

Arabidopsis Description

PBA1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:F4JRY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.