CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14124	Sorghum	cytosol	99.18	99.18
Zm00001d036108_P001	Maize	cytosol	94.69	93.55
Zm00001d045403_P001	Maize	cytosol	94.29	93.52
Os06t0139900-01	Rice	cytosol, plasma membrane, plastid	89.8	89.43
Os02t0770000-01	Rice	cytosol	87.35	86.99
TraesCS1B01G443900.1	Wheat	cytosol	84.49	84.84
TraesCS1D01G421300.1	Wheat	cytosol	84.08	84.43
TraesCS1A01G413900.1	Wheat	cytosol, golgi	84.08	84.43
GSMUA_Achr7P15820_001	Banana	cytosol	76.73	83.93
TraesCS7D01G078000.1	Wheat	cytosol, golgi	84.08	83.74
HORVU7Hr1G018660.1	Barley	cytosol	84.08	83.74
HORVU1Hr1G090810.1	Barley	cytosol	83.27	83.61
TraesCS7A01G083200.1	Wheat	cytosol	82.04	81.71
GSMUA_Achr5P24110_001	Banana	cytosol	77.14	81.12
CDY36450	Canola	cytosol	73.88	77.68
Bra010243.1-P	Field mustard	cytosol	73.47	77.25
Bra011257.1-P	Field mustard	cytosol	73.47	77.25
Bra024015.1-P	Field mustard	cytosol	73.47	77.25
CDX68732	Canola	cytosol	73.47	77.25
CDY28254	Canola	cytosol	73.47	77.25
CDY13421	Canola	cytosol	73.47	77.25
CDY23291	Canola	cytosol	73.47	77.25
VIT_11s0065g00320.t01	Wine grape	cytosol	73.06	77.16
CDX72300	Canola	cytosol	73.06	76.82
PGSC0003DMT400025311	Potato	cytosol	73.88	76.69
Solyc07g016200.2.1	Tomato	extracellular, plastid	73.88	76.69
KRH52623	Soybean	cytosol, nucleus	72.65	76.39
VIT_04s0008g02850.t01	Wine grape	cytosol	69.39	76.23
KRH61963	Soybean	endoplasmic reticulum	72.24	75.97
TraesCS4A01G381500.1	Wheat	cytosol	81.63	75.47
AT4G31300.2	Thale cress	cytosol	71.43	74.79
PGSC0003DMT400035591	Potato	cytosol	71.02	73.73
PGSC0003DMT400051560	Potato	cytosol	24.9	47.66
EER98255	Sorghum	cytosol	25.71	23.08
KXG19118	Sorghum	cytosol	25.31	22.71
EER89220	Sorghum	cytosol	24.9	21.79
OQU86162	Sorghum	plastid	6.94	10.76

Protein Annotations

MapMan:19.2.6.1.2.1	Gene3D:3.60.20.10	EntrezGene:8070706	UniProt:C5Z3R9	EnsemblPlants:EER89160	ProteinID:EER89160
ProteinID:EER89160.1	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PFAM:PF00227	PRINTS:PR00141	ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF102
InterPro:Pept_T1A_subB	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	EnsemblPlantsGene:SORBI_3010G029400	SUPFAM:SSF56235
unigene:Sbi.3581	UniParc:UPI0001A89AB2	RefSeq:XP_002437793.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:2362354..2366090

Molecular Weight (calculated)

26279.2 Da

IEP (calculated)

6.078

GRAVY (calculated)

-0.114

Length

245 amino acids

Sequence
(BLAST)

001: MDASHTGFSS AAGEAPTTGE HRMGTTIVGV CYDGGVILGA DSRTSTGMYV ANRASDKITQ LTDNVYVCRS GSAADTQVIS DYVRYFLHQH TIQLGQPATV
101: KVAANLIRLL AYQNKNMLQA GMIVGGWDKY EGGQIFSVPL GGTILKQPFA IGGSGSSYLY ALLDHEWKEG MSQEEAEKFV VKVVSLAMAR DGASGGVVRT
201: VTINADGVKR NFYPGDKLPL WHDELEPHHS LLDILAAGNP DPMVQ

Best Arabidopsis Sequence Match ( AT4G31300.3 )
(BLAST)

001: MDLNLDAPHS MGTTIIGVTY NGGVVLGADS RTSTGMYVAN RASDKITQLT DNVYVCRSGS AADSQVVSDY VRYFLHQHTI QHGQPATVKV SANLIRMLAY
101: NNKNMLQTGL IVGGWDKYEG GKIYGIPLGG TVVEQPFAIG GSGSSYLYGF FDQAWKDNMT KEEAEQLVVK AVSLAIARDG ASGGVVRTVI INSEGVTRNF
201: YPGDKLQLWH EELEPQNSLL DILNAAGPEP MAM

Arabidopsis Description

PBA1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:F4JRY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.