Factsheet for TraesCS4A01G381500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G083200.1	Wheat	cytosol	86.42	93.09
TraesCS1A01G413900.1	Wheat	cytosol, golgi	84.91	92.21
TraesCS7D01G078000.1	Wheat	cytosol, golgi	84.91	91.46
HORVU7Hr1G018660.1	Barley	cytosol	83.77	90.24
Os02t0770000-01	Rice	cytosol	79.62	85.77
Os06t0139900-01	Rice	cytosol, plasma membrane, plastid	78.87	84.96
Zm00001d036108_P001	Maize	cytosol	77.36	82.66
Zm00001d045403_P001	Maize	cytosol	76.6	82.19
EES14124	Sorghum	cytosol	75.85	82.04
EER89160	Sorghum	cytosol	75.47	81.63
GSMUA_Achr7P15820_001	Banana	cytosol	68.3	80.8
CDY36450	Canola	cytosol	68.3	77.68
GSMUA_Achr5P24110_001	Banana	cytosol	68.3	77.68
Bra011257.1-P	Field mustard	cytosol	68.3	77.68
VIT_11s0065g00320.t01	Wine grape	cytosol	67.92	77.59
CDY13421	Canola	cytosol	67.92	77.25
Bra024015.1-P	Field mustard	cytosol	67.92	77.25
PGSC0003DMT400025311	Potato	cytosol	68.68	77.12
Bra010243.1-P	Field mustard	cytosol	67.55	76.82
KRH52623	Soybean	cytosol, nucleus	67.55	76.82
CDY28254	Canola	cytosol	67.55	76.82
CDY23291	Canola	cytosol	67.55	76.82
CDX72300	Canola	cytosol	67.55	76.82
CDX68732	Canola	cytosol	67.55	76.82
VIT_04s0008g02850.t01	Wine grape	cytosol	64.53	76.68
KRH61963	Soybean	endoplasmic reticulum	67.17	76.39
Solyc07g016200.2.1	Tomato	extracellular, plastid	67.17	75.42
AT4G31300.2	Thale cress	cytosol	66.04	74.79
PGSC0003DMT400035591	Potato	cytosol	66.04	74.15
PGSC0003DMT400051560	Potato	cytosol	23.4	48.44
TraesCS1A01G122700.1	Wheat	cytosol	26.79	26.1
TraesCS7A01G110200.1	Wheat	cytosol	24.15	22.94

Protein Annotations

MapMan:19.2.6.1.2.1	Gene3D:3.60.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005839	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR023333
InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PRINTS:PR00141	ScanProsite:PS00854	PFscan:PS51476
PANTHER:PTHR11599	PANTHER:PTHR11599:SF102	InterPro:Pept_T1A_subB	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b
SUPFAM:SSF56235	EnsemblPlantsGene:TraesCS4A01G381500	EnsemblPlants:TraesCS4A01G381500.1	TIGR:cd03762	SEG:seg	:

Description

No Description!

Coordinates

chr4A:-:658956999..658961990

Molecular Weight (calculated)

28524.0 Da

IEP (calculated)

7.748

GRAVY (calculated)

-0.185

Length

265 amino acids

Sequence
(BLAST)

001: MDAASSLMGG PSSADAPTDG EHRMGTTIVG VCYAGGVVLA ADSRTSTGMY VANRASDKIS QLTDNVYVCR SGSAADTQVI SDYVRYFLHQ HTIQLGQPAT
101: VKVASNLVRL LAYQNKSMLQ AGMIVGGWDK YEGGQIYSVP LGGTILRQPF AIGGSGSSYL YGLMDHEWKE GMTQEEAEKF VVKVVSLAIA RDGASGGVVR
201: TVTINEEGVK RSFHPGDKLP LWHEEMEPQN SLLDILAAGS SDAMASIKYS KLAKWHLHAR KHAKR

Best Arabidopsis Sequence Match ( AT4G31300.3 )
(BLAST)

001: MDLNLDAPHS MGTTIIGVTY NGGVVLGADS RTSTGMYVAN RASDKITQLT DNVYVCRSGS AADSQVVSDY VRYFLHQHTI QHGQPATVKV SANLIRMLAY
101: NNKNMLQTGL IVGGWDKYEG GKIYGIPLGG TVVEQPFAIG GSGSSYLYGF FDQAWKDNMT KEEAEQLVVK AVSLAIARDG ASGGVVRTVI INSEGVTRNF
201: YPGDKLQLWH EELEPQNSLL DILNAAGPEP MAM

Arabidopsis Description

PBA1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:F4JRY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.