Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0139900-01 | Rice | cytosol, plasma membrane, plastid | 90.65 | 90.65 |
| TraesCS7A01G083200.1 | Wheat | cytosol | 87.8 | 87.8 |
| EER89160 | Sorghum | cytosol | 86.99 | 87.35 |
| EES14124 | Sorghum | cytosol | 86.99 | 87.35 |
| Zm00001d036108_P001 | Maize | cytosol | 87.8 | 87.1 |
| Zm00001d045403_P001 | Maize | cytosol | 87.4 | 87.04 |
| TraesCS1B01G443900.1 | Wheat | cytosol | 85.37 | 86.07 |
| TraesCS1D01G421300.1 | Wheat | cytosol | 84.96 | 85.66 |
| TraesCS1A01G413900.1 | Wheat | cytosol, golgi | 84.96 | 85.66 |
| TraesCS7D01G078000.1 | Wheat | cytosol, golgi | 85.37 | 85.37 |
| HORVU7Hr1G018660.1 | Barley | cytosol | 84.96 | 84.96 |
| HORVU1Hr1G090810.1 | Barley | cytosol | 84.15 | 84.84 |
| GSMUA_Achr7P15820_001 | Banana | cytosol | 76.02 | 83.48 |
| GSMUA_Achr5P24110_001 | Banana | cytosol | 76.42 | 80.69 |
| TraesCS4A01G381500.1 | Wheat | cytosol | 85.77 | 79.62 |
| Bra010243.1-P | Field mustard | cytosol | 74.39 | 78.54 |
| CDY36450 | Canola | cytosol | 74.39 | 78.54 |
| CDY28254 | Canola | cytosol | 74.39 | 78.54 |
| CDY23291 | Canola | cytosol | 74.39 | 78.54 |
| CDX68732 | Canola | cytosol | 74.39 | 78.54 |
| Bra011257.1-P | Field mustard | cytosol | 73.98 | 78.11 |
| CDY13421 | Canola | cytosol | 73.98 | 78.11 |
| Bra024015.1-P | Field mustard | cytosol | 73.98 | 78.11 |
| CDX72300 | Canola | cytosol | 73.58 | 77.68 |
| VIT_11s0065g00320.t01 | Wine grape | cytosol | 73.17 | 77.59 |
| PGSC0003DMT400025311 | Potato | cytosol | 74.39 | 77.54 |
| VIT_04s0008g02850.t01 | Wine grape | cytosol | 69.92 | 77.13 |
| Solyc07g016200.2.1 | Tomato | extracellular, plastid | 73.58 | 76.69 |
| PGSC0003DMT400035591 | Potato | cytosol | 73.17 | 76.27 |
| KRH52623 | Soybean | cytosol, nucleus | 71.95 | 75.97 |
| AT4G31300.2 | Thale cress | cytosol | 71.95 | 75.64 |
| KRH61963 | Soybean | endoplasmic reticulum | 71.54 | 75.54 |
| PGSC0003DMT400051560 | Potato | cytosol | 25.2 | 48.44 |
| Os05t0187000-01 | Rice | plastid | 26.42 | 23.9 |
| Os06t0153800-01 | Rice | plasma membrane, plastid | 26.02 | 23.1 |
Protein Annotations
| MapMan:19.2.6.1.2.1 | Gene3D:3.60.20.10 | EntrezGene:4330861 | EMBL:AB026563 | EMBL:AK059837 | EMBL:AK103425 |
| EMBL:AK104505 | ProteinID:BAD16916.1 | ProteinID:BAF10161.1 | ProteinID:BAS81106.1 | ProteinID:EAZ24757.1 | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0051603 | InterPro:IPR023333 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | EnsemblPlantsGene:Os02g0770000 | EnsemblPlants:Os02t0770000-01 |
| PFAM:PF00227 | PRINTS:PR00141 | ScanProsite:PS00854 | PFscan:PS51476 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF102 |
| InterPro:Pept_T1A_subB | InterPro:Proteasome_bsu_CS | InterPro:Proteasome_suB-type | InterPro:Proteasome_sua/b | UniProt:Q9LST9 | SUPFAM:SSF56235 |
| MEROPS:T01.010 | UniParc:UPI00000A6796 | RefSeq:XP_015625800.1 | SEG:seg | : | : |
Description
20S proteasome beta1 subunitBeta 1 subunit of 20S proteasome. (Os02t0770000-01);Beta 1 subunit of 20S proteasome. (Os02t0770000-02)
Coordinates
chr2:-:32465064..32468593
Molecular Weight (calculated)
26275.3 Da
IEP (calculated)
5.576
GRAVY (calculated)
-0.095
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MDASLMGAPS AAAGDNPTSG EHRMGTTIVG VCYDGGVVLA ADSRTSTGMY VANRASDKIT QLTDNVYICR SGSAADTQVI SDYVRYFLHQ HTIQLGQPAT
101: VKVAANLIRL LAYQNKNMLQ AGMIVGGWDK YEGGQIFSVP LGGTILRQPF AIGGSGSSYL YGLLDHEWKE GMSQEEAEKF VVKVVSLAIA RDGASGGVVR
201: TVTINADGVS RKFHPGDKLQ LWHEELEPQN SLLDILAAGN PDPMVQ
101: VKVAANLIRL LAYQNKNMLQ AGMIVGGWDK YEGGQIFSVP LGGTILRQPF AIGGSGSSYL YGLLDHEWKE GMSQEEAEKF VVKVVSLAIA RDGASGGVVR
201: TVTINADGVS RKFHPGDKLQ LWHEELEPQN SLLDILAAGN PDPMVQ
001: MDLNLDAPHS MGTTIIGVTY NGGVVLGADS RTSTGMYVAN RASDKITQLT DNVYVCRSGS AADSQVVSDY VRYFLHQHTI QHGQPATVKV SANLIRMLAY
101: NNKNMLQTGL IVGGWDKYEG GKIYGIPLGG TVVEQPFAIG GSGSSYLYGF FDQAWKDNMT KEEAEQLVVK AVSLAIARDG ASGGVVRTVI INSEGVTRNF
201: YPGDKLQLWH EELEPQNSLL DILNAAGPEP MAM
101: NNKNMLQTGL IVGGWDKYEG GKIYGIPLGG TVVEQPFAIG GSGSSYLYGF FDQAWKDNMT KEEAEQLVVK AVSLAIARDG ASGGVVRTVI INSEGVTRNF
201: YPGDKLQLWH EELEPQNSLL DILNAAGPEP MAM
Arabidopsis Description
PBA1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:F4JRY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.