Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G069370.1 | Barley | cytosol, nucleus | 89.89 | 89.89 |
| TraesCS1D01G302400.1 | Wheat | nucleus | 65.38 | 54.09 |
| TraesCS1B01G313300.1 | Wheat | nucleus | 66.88 | 53.62 |
| TraesCS1A01G303000.2 | Wheat | nucleus | 64.09 | 52.28 |
| Zm00001d038509_P001 | Maize | mitochondrion | 35.91 | 31.39 |
| HORVU4Hr1G023340.2 | Barley | nucleus | 24.52 | 30.48 |
| EES19707 | Sorghum | nucleus | 35.48 | 29.52 |
| Zm00001d010623_P001 | Maize | plastid | 30.97 | 29.21 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G069350.7 | EnsemblPlantsGene:HORVU1Hr1G069350 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF4 | SEG:seg |
| UniParc:UPI000B471521 | UniProt:A0A287G3J6 | MapMan:20.2.4.4 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:484727779..484729799
Molecular Weight (calculated)
50801.3 Da
IEP (calculated)
5.088
GRAVY (calculated)
-0.918
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: TSSLRVSPRA GRPNEPITSS SPRSGRQNDM FAQDPVTMLY TSTSSATNDD SKSSPVKKDE TKQGLWGLLA QQAKVMLEES SPTEDARSQP PATSGGSPQA
101: QSRWSYDRVR KSESPTFQNG SEGPKFDMGG HIKNALEEGL HAATMAESRT PAVVGRKLQI RRKTCSVDMR VANLNLGTPE VMSPMMTDFE SPQIKASRDV
201: ANVMAAKVKL LQRELKTVNA DLAFSKERCA QLEEETRLHR AGNHDHAANE DLIRQQLETL LAEKARLANE NTVYARENRF LREIVDLNQL NVVGLQQDII
301: EEEAEEEEYE EEEDAVNPEE ADHDTPATHG TAPSQSPSHH TDNVLASTPP SPRRRTDNVP VATPQSPSRR TDNVAVPAPQ SPLGRTDNVP AAAPQSPSCH
401: TENAPVAAPH PPSPHTDNAP ESRSTDNSSS AAIADAESPM HRSSKEDSGS PHMPENAFQQ QQYHD
101: QSRWSYDRVR KSESPTFQNG SEGPKFDMGG HIKNALEEGL HAATMAESRT PAVVGRKLQI RRKTCSVDMR VANLNLGTPE VMSPMMTDFE SPQIKASRDV
201: ANVMAAKVKL LQRELKTVNA DLAFSKERCA QLEEETRLHR AGNHDHAANE DLIRQQLETL LAEKARLANE NTVYARENRF LREIVDLNQL NVVGLQQDII
301: EEEAEEEEYE EEEDAVNPEE ADHDTPATHG TAPSQSPSHH TDNVLASTPP SPRRRTDNVP VATPQSPSRR TDNVAVPAPQ SPLGRTDNVP AAAPQSPSCH
401: TENAPVAAPH PPSPHTDNAP ESRSTDNSSS AAIADAESPM HRSSKEDSGS PHMPENAFQQ QQYHD
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.