Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G313300.1 | Wheat | nucleus | 91.46 | 88.62 |
| TraesCS1A01G303000.2 | Wheat | nucleus | 86.65 | 85.44 |
| HORVU1Hr1G069350.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 54.09 | 65.38 |
| HORVU1Hr1G069370.1 | Barley | cytosol, nucleus | 53.38 | 64.52 |
| Zm00001d038509_P001 | Maize | mitochondrion | 36.48 | 38.53 |
| Zm00001d010623_P001 | Maize | plastid | 33.27 | 37.93 |
| EES19707 | Sorghum | nucleus | 37.54 | 37.75 |
| TraesCS4D01G120600.1 | Wheat | nucleus | 23.31 | 34.93 |
| TraesCS1D01G124900.2 | Wheat | nucleus | 24.56 | 31.87 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 13.35 | 23.36 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G302400.1 | EnsemblPlantsGene:TraesCS1D01G302400 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF4 | SEG:seg |
| MapMan:20.2.4.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:400064330..400066836
Molecular Weight (calculated)
60857.4 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.866
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYRRKQGIQ RSNTFVEDHR QPSPGDSASP ATASPRATRF ADDSRRPDRS LAAQTLLASA ARGDMQALAE RFTASSSSPL AARPSDPVTS SSLRVSPRAA
101: RPADPATSSS LRVSPRAARP ADPITSTSPR ASPRAGRQND MFSQDPVTML YTSTSSATND DSKLSPVKKD EAKQGLWGLL AQQAKAMLDE SAPTEDARSQ
201: PLVTSAGSPQ AQSRWSYDPV RKSESPTFQN GSEGPKFDMG GHIKNALEEG LHAATMAESR TPAVVGRKLQ IRRKTCSVDM RSAHLNLGTP ELMSPMMTDF
301: ESPQIKASRD VANVMAAKVK LLQRELKTVN ADLAFSKERC AQLEEETRLQ RAGNHDHAAN EDLVRKQLET LLAEKARLAT ENTVYARENR FLREIVDLNQ
401: LTVVGLQEDI IEEEEEEYEE EEEAEHDTPA NPGTAPPKPP SHHTNNVHVA AAQPPSRRTD NAAVPAPQPP SRRTENAPVA APQSPSRRAD NVPVATPHPP
501: SPCTDKAPEP RSADNSSSAA TGVAGSPMHR SPKEDEGSQQ TNPIEDNCSP EKASPQQQQC QD
101: RPADPATSSS LRVSPRAARP ADPITSTSPR ASPRAGRQND MFSQDPVTML YTSTSSATND DSKLSPVKKD EAKQGLWGLL AQQAKAMLDE SAPTEDARSQ
201: PLVTSAGSPQ AQSRWSYDPV RKSESPTFQN GSEGPKFDMG GHIKNALEEG LHAATMAESR TPAVVGRKLQ IRRKTCSVDM RSAHLNLGTP ELMSPMMTDF
301: ESPQIKASRD VANVMAAKVK LLQRELKTVN ADLAFSKERC AQLEEETRLQ RAGNHDHAAN EDLVRKQLET LLAEKARLAT ENTVYARENR FLREIVDLNQ
401: LTVVGLQEDI IEEEEEEYEE EEEAEHDTPA NPGTAPPKPP SHHTNNVHVA AAQPPSRRTD NAAVPAPQPP SRRTENAPVA APQSPSRRAD NVPVATPHPP
501: SPCTDKAPEP RSADNSSSAA TGVAGSPMHR SPKEDEGSQQ TNPIEDNCSP EKASPQQQQC QD
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.