Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038509_P001 | Maize | mitochondrion | 50.1 | 46.43 |
| Zm00001d010455_P013 | Maize | plastid | 28.4 | 37.43 |
| TraesCS1D01G302400.1 | Wheat | nucleus | 37.93 | 33.27 |
| Zm00001d044674_P003 | Maize | mitochondrion, nucleus | 25.15 | 32.8 |
| TraesCS1A01G303000.2 | Wheat | nucleus | 37.32 | 32.28 |
| TraesCS1B01G313300.1 | Wheat | nucleus | 37.93 | 32.24 |
| HORVU1Hr1G069350.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 29.21 | 30.97 |
| HORVU1Hr1G069370.1 | Barley | cytosol, nucleus | 28.4 | 30.11 |
| Zm00001d004133_P001 | Maize | cytosol | 13.39 | 20.43 |
Protein Annotations
| EnsemblPlants:Zm00001d010623_P001 | EnsemblPlants:Zm00001d010623_T001 | EnsemblPlantsGene:Zm00001d010623 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF4 |
| ProteinID:AQK94493.1 | SEG:seg | UniParc:UPI000220A457 | UniProt:K7VWI6 | MapMan:20.2.4.4 | : |
Description
Whole genome shotgun sequence of line PN40024 scaffold_56.assembly12x (Fragment)
Coordinates
chr8:-:122212785..122215070
Molecular Weight (calculated)
54040.0 Da
IEP (calculated)
6.390
GRAVY (calculated)
-0.734
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHPSLPARG TGSPGKSSTP PRSSLHPRNG AQSARFLPRL RATALVMAYR RKQAIQRSAT FVEDHRQTSS GGSASPAVAS PRATRFADDS RRPDRSSCLA
101: AQAMATSSDA RGDGDLTLPS FSERLPTAAA ASQCAAEPSS PVQDPVTHLY TSTTSLNDEG PKYDLELSKK DHRKHGFWGL VAQKAKVMLD ENGTPRPQAK
201: TSESLWSYDR VQGSLGGRLD IRGKIKDVLQ QEGLLVVADS TTPGTSGGVV VAARKLQIRR KACSMANLTP ATPDMESPRI IKASRDVANA MAAKLKLLQR
301: ELKALKADLS FSKEWCAQLE EENRLLRDGN HDADEDLIRQ QLETLLAEKA RLAHENTAYA RENRFLREVV EYHQLNMQDV VGLDDDDIDA DADYDVELEA
401: EQYQDRRRSL PFHQLVLEEE EHQAADPGTE PQSPSRCTES PRMLSTNSGG SPDHESSQRM LNTNSGVGIA IESPRNRMLS TNSGESTQSF DQE
101: AQAMATSSDA RGDGDLTLPS FSERLPTAAA ASQCAAEPSS PVQDPVTHLY TSTTSLNDEG PKYDLELSKK DHRKHGFWGL VAQKAKVMLD ENGTPRPQAK
201: TSESLWSYDR VQGSLGGRLD IRGKIKDVLQ QEGLLVVADS TTPGTSGGVV VAARKLQIRR KACSMANLTP ATPDMESPRI IKASRDVANA MAAKLKLLQR
301: ELKALKADLS FSKEWCAQLE EENRLLRDGN HDADEDLIRQ QLETLLAEKA RLAHENTAYA RENRFLREVV EYHQLNMQDV VGLDDDDIDA DADYDVELEA
401: EQYQDRRRSL PFHQLVLEEE EHQAADPGTE PQSPSRCTES PRMLSTNSGG SPDHESSQRM LNTNSGVGIA IESPRNRMLS TNSGESTQSF DQE
001: MAYRRRQGIT RASTFKEDIY HQPPDPDHGD LKGHSNGGSF RSSQSFSSHS SLAAQAIRAS SQAQGFTAYE DKSESRGFWG ILAQKAKSIL EDEEEQQQQQ
101: QQQNDVIFEP SNPTIRKSID KITTSLNHIG DSFEKAFEEG RTIVASQIRR KGSDLIDSDN NNYHQSSGSS SPWQPLTQPN PRESQLKASR DVAMATAAKA
201: KLLLRELKTV KADLAFAKER CSQLEEENKR LRDNRDKGNN NPADDDLIRL QLETLLAEKA RLAHENSIYA RENRFLREIV EYHQLTMQDV VYIDEGIEEV
301: AEVNPSITRT LSMASYSASE LPSISPSPSS PASPSRLSVS TDIYPILVQQ SSTNDITVES PKPVRPPSLG YTDDGKRPSS QLPSSQLSV
101: QQQNDVIFEP SNPTIRKSID KITTSLNHIG DSFEKAFEEG RTIVASQIRR KGSDLIDSDN NNYHQSSGSS SPWQPLTQPN PRESQLKASR DVAMATAAKA
201: KLLLRELKTV KADLAFAKER CSQLEEENKR LRDNRDKGNN NPADDDLIRL QLETLLAEKA RLAHENSIYA RENRFLREIV EYHQLTMQDV VYIDEGIEEV
301: AEVNPSITRT LSMASYSASE LPSISPSPSS PASPSRLSVS TDIYPILVQQ SSTNDITVES PKPVRPPSLG YTDDGKRPSS QLPSSQLSV
Arabidopsis Description
Tropomyosin [Source:UniProtKB/TrEMBL;Acc:Q9C8R6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.