Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11875 | Sorghum | cytosol, nucleus, plastid | 75.85 | 78.53 |
| Os04t0228100-01 | Rice | nucleus | 65.02 | 66.04 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 55.42 | 55.59 |
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 56.35 | 55.49 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 54.49 | 54.83 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 44.89 | 43.94 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 43.96 | 41.64 |
| KRH67202 | Soybean | nucleus, plastid | 40.87 | 40.12 |
| KRG95525 | Soybean | nucleus, plastid | 41.8 | 39.71 |
| CDX90923 | Canola | nucleus, plastid | 39.32 | 38.84 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 39.32 | 38.72 |
| Solyc06g008980.2.1 | Tomato | nucleus | 39.63 | 38.55 |
| PGSC0003DMT400037917 | Potato | nucleus | 39.32 | 38.14 |
| AT4G02800.1 | Thale cress | nucleus | 39.32 | 38.14 |
| CDY17988 | Canola | nucleus | 39.32 | 37.69 |
| Zm00001d044674_P003 | Maize | mitochondrion, nucleus | 24.15 | 20.63 |
| Zm00001d010455_P013 | Maize | plastid | 23.84 | 20.59 |
| Zm00001d038509_P001 | Maize | mitochondrion | 22.6 | 13.72 |
| Zm00001d010623_P001 | Maize | plastid | 20.43 | 13.39 |
Protein Annotations
| EMBL:BT033399 | EMBL:EU966903 | EnsemblPlants:Zm00001d004133_P001 | EnsemblPlants:Zm00001d004133_T001 | EnsemblPlantsGene:Zm00001d004133 | EntrezGene:100191331 |
| ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 | ProteinID:ONM18499.1 | SEG:seg | UniParc:UPI00017B6368 |
| UniProt:B4F8G1 | MapMan:20.2.4.4 | : | : | : | : |
Description
OSJNBa0065B15.1 protein; OSJNBb0071D01.5 protein; protein
Coordinates
chr2:-:85452984..85454824
Molecular Weight (calculated)
34810.5 Da
IEP (calculated)
4.321
GRAVY (calculated)
-0.629
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSATVALAS PASDDRRFWD RLRTRVDTIL EDRRGLPPAA AAGAPMRGVE SERGKRLRED SLMLVRGLDS VAESLAQLSD TLTAAQKGVS ALATCSSQAR
101: GCEGGACPCP EEVKAEEEEP RAKRMCGGST EDSPRNGLDS NSPAAGEETA AGPDGLGKGN VQASAEIAQS TNLKRARSLA VSMASRAAAL ARELKNIKSE
201: LHFMQERCGL LEEENKRLRE GCDNGVAPEE DDLVRLQLEA LLAEKSRLAQ ENANLTRENQ GLMQLVEYHQ LASQDLDESY EDVMQGIRLD FSSPLGKISD
301: DEEGERDDEV PVTPAEVPCS PDE
101: GCEGGACPCP EEVKAEEEEP RAKRMCGGST EDSPRNGLDS NSPAAGEETA AGPDGLGKGN VQASAEIAQS TNLKRARSLA VSMASRAAAL ARELKNIKSE
201: LHFMQERCGL LEEENKRLRE GCDNGVAPEE DDLVRLQLEA LLAEKSRLAQ ENANLTRENQ GLMQLVEYHQ LASQDLDESY EDVMQGIRLD FSSPLGKISD
301: DEEGERDDEV PVTPAEVPCS PDE
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Arabidopsis Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.