Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 85.4 | 83.84 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 82.3 | 82.55 |
| Os04t0228100-01 | Rice | nucleus | 65.22 | 66.04 |
| EES11875 | Sorghum | cytosol, nucleus, plastid | 58.7 | 60.58 |
| Zm00001d004133_P001 | Maize | cytosol | 55.59 | 55.42 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 40.68 | 39.7 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 40.06 | 37.83 |
| Solyc06g008980.2.1 | Tomato | nucleus | 38.51 | 37.35 |
| PGSC0003DMT400037917 | Potato | nucleus | 38.51 | 37.24 |
| KRG95525 | Soybean | nucleus, plastid | 38.82 | 36.76 |
| AT4G02800.1 | Thale cress | nucleus | 37.58 | 36.34 |
| KRH67202 | Soybean | nucleus, plastid | 36.96 | 36.17 |
| CDY17988 | Canola | nucleus | 36.96 | 35.31 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 35.71 | 35.06 |
| CDX90923 | Canola | nucleus, plastid | 34.16 | 33.64 |
| TraesCS4A01G192700.1 | Wheat | nucleus | 23.91 | 20.53 |
| TraesCS1A01G128300.1 | Wheat | cytosol, plastid | 23.91 | 17.78 |
| TraesCS1A01G303000.2 | Wheat | nucleus | 23.29 | 13.16 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G067400.1 | EnsemblPlantsGene:TraesCS2A01G067400 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 | SEG:seg |
| MapMan:20.2.4.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:30130889..30132607
Molecular Weight (calculated)
34558.3 Da
IEP (calculated)
4.333
GRAVY (calculated)
-0.432
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSAAASSLV VSPASDDRFW DGLRTRVDTI IEDRRLVASA ASTCAAASGR PKRLREDSLM LVRGLDSVAA SLAQLSDTLT AAQKGVNALA MCSSQARERE
101: SGEEEPDAKR RCTASTEFAS LEAQIVVNES SDNGAADAKP RAMPNGDVVV ASAEVAQSTN LKRARSLAVS MAGRAANLAR ELTTIKSELR FMQERCGLLE
201: EENKRLRDGY DSGGGAAPEE DDLVRLQLEA LLAEKSRLAQ ENANLARENQ SLVQLVEYHQ LTAQEEEEEE DHLLTASYEE AIMQGMRLDF SSPLGKFDGE
301: GELDGVPATP GSKLGALVSP DE
101: SGEEEPDAKR RCTASTEFAS LEAQIVVNES SDNGAADAKP RAMPNGDVVV ASAEVAQSTN LKRARSLAVS MAGRAANLAR ELTTIKSELR FMQERCGLLE
201: EENKRLRDGY DSGGGAAPEE DDLVRLQLEA LLAEKSRLAQ ENANLARENQ SLVQLVEYHQ LTAQEEEEEE DHLLTASYEE AIMQGMRLDF SSPLGKFDGE
301: GELDGVPATP GSKLGALVSP DE
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Arabidopsis Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.