Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004133_P001 | Maize | cytosol | 78.53 | 75.85 |
| Os04t0228100-01 | Rice | nucleus | 70.51 | 69.18 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 60.58 | 58.7 |
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 60.9 | 57.93 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 59.29 | 57.63 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 47.12 | 44.55 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 45.51 | 41.64 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 41.03 | 39.02 |
| AT4G02800.1 | Thale cress | nucleus | 41.35 | 38.74 |
| KRH67202 | Soybean | nucleus, plastid | 40.71 | 38.6 |
| KRG95525 | Soybean | nucleus, plastid | 41.99 | 38.53 |
| CDY17988 | Canola | nucleus | 41.35 | 38.28 |
| CDX90923 | Canola | nucleus, plastid | 40.06 | 38.23 |
| Solyc06g008980.2.1 | Tomato | nucleus | 39.74 | 37.35 |
| PGSC0003DMT400037917 | Potato | nucleus | 39.74 | 37.24 |
| EES16589 | Sorghum | mitochondrion, nucleus | 26.92 | 22.76 |
| OQU77734 | Sorghum | nucleus, plastid | 16.35 | 17.41 |
| EES19707 | Sorghum | nucleus | 22.76 | 12.7 |
Protein Annotations
| EnsemblPlants:EES11875 | EnsemblPlantsGene:SORBI_3006G031400 | EntrezGene:8069409 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 |
| ProteinID:EES11875 | ProteinID:EES11875.1 | RefSeq:XP_002447547.1 | SEG:seg | unigene:Sbi.13975 | UniParc:UPI0001A87331 |
| UniProt:C5YD86 | MapMan:20.2.4.4 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:6744040..6745770
Molecular Weight (calculated)
33818.3 Da
IEP (calculated)
4.321
GRAVY (calculated)
-0.601
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MESATVALAS PASDDRRFWD RLRTRVDTIL EDRRDLPAAA APTRVVESER GKRLREDSLM LVRGLDSVVA SLAQLSDTLT AAQKGVSALA TCSSQARGCE
101: GGACPEEVEE EEPKAKRMCG GSTEDSPRNS NSPAAGEETA AGPDGLGKGN VQASAEVAQS TNLKRARNLA VSMASRAAAL ARELKNIKSE LHFMQERCGL
201: LEEENKRLRE GCDNGVAPEE DDLVRLQLEA LLAEKSRLAQ ENANLTRENQ SLMQLVEYHQ LTSQDLDDSY EDVMQGIRLD FSSPLGRISD NEGECEDDVP
301: VTPAEALCSP DE
101: GGACPEEVEE EEPKAKRMCG GSTEDSPRNS NSPAAGEETA AGPDGLGKGN VQASAEVAQS TNLKRARNLA VSMASRAAAL ARELKNIKSE LHFMQERCGL
201: LEEENKRLRE GCDNGVAPEE DDLVRLQLEA LLAEKSRLAQ ENANLTRENQ SLMQLVEYHQ LTSQDLDDSY EDVMQGIRLD FSSPLGRISD NEGECEDDVP
301: VTPAEALCSP DE
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Arabidopsis Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.