Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11875 | Sorghum | cytosol, nucleus, plastid | 44.55 | 47.12 |
| Os04t0228100-01 | Rice | nucleus | 43.94 | 45.6 |
| Zm00001d004133_P001 | Maize | cytosol | 43.94 | 44.89 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 44.24 | 42.82 |
| AT4G02800.1 | Thale cress | nucleus | 43.03 | 42.64 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 41.52 | 41.77 |
| CDX90923 | Canola | nucleus, plastid | 40.91 | 41.28 |
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 40.61 | 40.85 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 39.7 | 40.68 |
| CDY17988 | Canola | nucleus | 41.52 | 40.65 |
| KRH67202 | Soybean | nucleus, plastid | 39.7 | 39.82 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 38.48 | 39.56 |
| KRG95525 | Soybean | nucleus, plastid | 40.61 | 39.41 |
| PGSC0003DMT400037917 | Potato | nucleus | 37.58 | 37.24 |
| Solyc06g008980.2.1 | Tomato | nucleus | 37.27 | 37.05 |
| GSMUA_Achr4P10350_001 | Banana | nucleus | 21.82 | 26.09 |
| GSMUA_Achr3P09690_001 | Banana | mitochondrion | 24.85 | 19.39 |
| GSMUA_Achr8P21430_001 | Banana | mitochondrion | 25.76 | 18.64 |
| GSMUA_Achr1P24410_001 | Banana | nucleus | 23.03 | 17.97 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P13100_001 | EnsemblPlants:GSMUA_Achr8T13100_001 | EnsemblPlantsGene:GSMUA_Achr8G13100_001 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 |
| SEG:seg | UniParc:UPI0002956767 | UniProt:M0TQ13 | MapMan:20.2.4.4 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G13100_001]
Coordinates
chr8:+:9856876..9861117
Molecular Weight (calculated)
36996.0 Da
IEP (calculated)
4.761
GRAVY (calculated)
-0.772
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSAAPAIS PSSDERLWSR LRDRVDSILD NCGPKIDLPP SSSCRVESEC GKRLREDSEL LIKGFDSVSS SLSQLSSTLS STQQRVTYLT KSSVAEELPR
101: ERQKTESEEP KAKRHCDSTE QTKYEANSSN KHEAAALKSS ADNNKLANSN EGDNEIASYP MQNATMKKAK TLAVMMATKA SYLSRELKTI KSELSFMQER
201: CNLLEEENTR FQEDFDKGVR PEEDDLVRLQ LEVLLAEKSR LANENANLMR ENQCLHQLVE YHHLTSQDLS ASYEQAALHG MCLDFSSPMP KSDIDDENGH
301: SDCEVPFTPS TGKLGLFSSL DEHLEIHHDT
101: ERQKTESEEP KAKRHCDSTE QTKYEANSSN KHEAAALKSS ADNNKLANSN EGDNEIASYP MQNATMKKAK TLAVMMATKA SYLSRELKTI KSELSFMQER
201: CNLLEEENTR FQEDFDKGVR PEEDDLVRLQ LEVLLAEKSR LANENANLMR ENQCLHQLVE YHHLTSQDLS ASYEQAALHG MCLDFSSPMP KSDIDDENGH
301: SDCEVPFTPS TGKLGLFSSL DEHLEIHHDT
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Arabidopsis Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.