Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P24410_001 | Banana | nucleus | 51.09 | 33.33 |
| Os11t0118800-01 | Rice | nucleus | 44.93 | 33.33 |
| EES16589 | Sorghum | mitochondrion, nucleus | 42.75 | 31.98 |
| GSMUA_Achr3P09690_001 | Banana | mitochondrion | 48.55 | 31.68 |
| TraesCS4A01G192700.1 | Wheat | nucleus | 42.75 | 31.47 |
| TraesCS4D01G120600.1 | Wheat | nucleus | 42.39 | 31.2 |
| HORVU4Hr1G023340.2 | Barley | nucleus | 42.03 | 31.02 |
| TraesCS4B01G122600.2 | Wheat | nucleus | 42.03 | 30.93 |
| Zm00001d044674_P003 | Maize | mitochondrion, nucleus | 40.58 | 29.63 |
| GSMUA_Achr8P21430_001 | Banana | mitochondrion | 48.19 | 29.17 |
| Os12t0118200-01 | Rice | nucleus | 26.09 | 28.8 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 26.09 | 21.82 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P10350_001 | EnsemblPlants:GSMUA_Achr4T10350_001 | EnsemblPlantsGene:GSMUA_Achr4G10350_001 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF6 |
| SEG:seg | UniParc:UPI000294E63C | UniProt:M0SMQ2 | MapMan:20.2.4.4 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G10350_001]
Coordinates
chr4:+:7515195..7516715
Molecular Weight (calculated)
30972.4 Da
IEP (calculated)
4.747
GRAVY (calculated)
-0.674
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MQFQSPLISE NHQSTKVLTS WGGSDKISSS LREIGGTTKS EFEEEHMTAD MIQETGKLQI RRKPGVSDTT FQFAEPSTPT NLNHNQVGSE VQAKVSGDVA
101: NVMAAKAKLL LRELKIVKAD LATAKERCAK LEEENKILRE NRQKGETPAD DDLIRLQLET LLAEKARLAH ENSIYARENR FLRETVEYHQ FTMQEDIVYL
201: DDQGIEEEAE AYPIHQMQPF YAPLQSVPEG SSPVLPSSPS PSMHSSSSEL NTTAETMPTA EGSMMMMQQQ QHPYPF
101: NVMAAKAKLL LRELKIVKAD LATAKERCAK LEEENKILRE NRQKGETPAD DDLIRLQLET LLAEKARLAH ENSIYARENR FLRETVEYHQ FTMQEDIVYL
201: DDQGIEEEAE AYPIHQMQPF YAPLQSVPEG SSPVLPSSPS PSMHSSSSEL NTTAETMPTA EGSMMMMQQQ QHPYPF
001: MDNPKLRRGL DKLTSSLNQI GDTFEKAFED GRTLVENKTA DIIQETRKLQ TRRRGTGGED ENQNQSYGVS SSWKKSPEQP MQLNHIEHET QLKASRDVAM
101: ATAAKAKLLL RELKTVKADL AFAKERCAQL EEENKHLRES HREKGSNPAD EDLIRLQLES LLAEKARLAH ENSVYARENR FLREIVEYHQ LTMQDVVYID
201: EGSEEVTQVS PFVSTLMTSS PADRSQSPPS QEMIKEMLVV AEESSVCASV VSVS
101: ATAAKAKLLL RELKTVKADL AFAKERCAQL EEENKHLRES HREKGSNPAD EDLIRLQLES LLAEKARLAH ENSVYARENR FLREIVEYHQ LTMQDVVYID
201: EGSEEVTQVS PFVSTLMTSS PADRSQSPPS QEMIKEMLVV AEESSVCASV VSVS
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.