Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0118200-01 | Rice | nucleus | 64.52 | 96.0 |
| EES16589 | Sorghum | mitochondrion, nucleus | 66.4 | 66.94 |
| TraesCS4B01G122600.2 | Wheat | nucleus | 66.13 | 65.6 |
| HORVU4Hr1G023340.2 | Barley | nucleus | 65.86 | 65.51 |
| Zm00001d044674_P003 | Maize | mitochondrion, nucleus | 63.71 | 62.7 |
| TraesCS4D01G120600.1 | Wheat | nucleus | 62.9 | 62.4 |
| TraesCS4A01G192700.1 | Wheat | nucleus | 61.83 | 61.33 |
| GSMUA_Achr4P10350_001 | Banana | nucleus | 33.33 | 44.93 |
| Os05t0315200-01 | Rice | plasma membrane | 44.09 | 39.14 |
| GSMUA_Achr1P24410_001 | Banana | nucleus | 38.98 | 34.28 |
| Os04t0228100-01 | Rice | nucleus | 21.24 | 24.84 |
Protein Annotations
| EMBL:AK120973 | EnsemblPlants:Os11t0118800-01 | EnsemblPlantsGene:Os11g0118800 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF5 |
| ProteinID:ABA91180.1 | ProteinID:BAF27445.1 | ProteinID:BAT12435.1 | ProteinID:EEE51537.1 | SEG:seg | UniParc:UPI00006825A8 |
| UniProt:Q2RBA7 | MapMan:20.2.4.4 | : | : | : | : |
Description
Similar to Expressed protein-like protein. (Os11t0118800-01)
Coordinates
chr11:-:845215..848343
Molecular Weight (calculated)
41337.8 Da
IEP (calculated)
5.595
GRAVY (calculated)
-0.876
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYRRKQGPI AADDRRSSYP QSPQGSSSSY SYTSIKSMNE PKLGLWETLA RKAKGILDED GVAHKSDEYT KEKTPRKFDS STGAQESQSR WSFENHSKTG
101: DTGSRTRSEA LAASVNQLGG RIRDALEEGL TIVDNKTSNI IEETKKIQIR RKQANSNSYV PNLAFDTLRP PNLSNDQAET AAQETQLKAS RDVANAMAAK
201: AKLVLRELKT VKADLAFAKQ RCAQLEEENK FLREAKQKGS KTEEDDDLIR VQLETLLAEK SRLAQENSMY ARENRFLREI VDFHQFTTHD VAPLDDGDME
301: DSIPGEDSNH TYSEDMFPVV EAYLDREELS PVPSRPESPI LSSCESSSPK SSNSKSSAAN LPSNVSAKCI GT
101: DTGSRTRSEA LAASVNQLGG RIRDALEEGL TIVDNKTSNI IEETKKIQIR RKQANSNSYV PNLAFDTLRP PNLSNDQAET AAQETQLKAS RDVANAMAAK
201: AKLVLRELKT VKADLAFAKQ RCAQLEEENK FLREAKQKGS KTEEDDDLIR VQLETLLAEK SRLAQENSMY ARENRFLREI VDFHQFTTHD VAPLDDGDME
301: DSIPGEDSNH TYSEDMFPVV EAYLDREELS PVPSRPESPI LSSCESSSPK SSNSKSSAAN LPSNVSAKCI GT
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [nucleus,mitochondrion]
SUBAcon: [nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.