Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G122600.2 | Wheat | nucleus | 93.05 | 92.8 |
| TraesCS4D01G120600.1 | Wheat | nucleus | 85.56 | 85.33 |
| TraesCS4A01G192700.1 | Wheat | nucleus | 85.29 | 85.07 |
| Os11t0118800-01 | Rice | nucleus | 65.51 | 65.86 |
| Os12t0118200-01 | Rice | nucleus | 43.85 | 65.6 |
| EES16589 | Sorghum | mitochondrion, nucleus | 59.09 | 59.89 |
| Zm00001d044674_P003 | Maize | mitochondrion, nucleus | 56.15 | 55.56 |
| GSMUA_Achr4P10350_001 | Banana | nucleus | 31.02 | 42.03 |
| GSMUA_Achr1P24410_001 | Banana | nucleus | 39.84 | 35.22 |
| HORVU1Hr1G069350.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 30.48 | 24.52 |
| HORVU1Hr1G069370.1 | Barley | cytosol, nucleus | 30.21 | 24.3 |
Protein Annotations
| EMBL:AK365830 | EnsemblPlants:HORVU4Hr1G023340.2 | EnsemblPlantsGene:HORVU4Hr1G023340 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF5 |
| UniParc:UPI0002006B78 | UniProt:F2DPL2 | MapMan:20.2.4.4 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DPL2]
Coordinates
chrchr4H:-:125675296..125679262
Molecular Weight (calculated)
41572.7 Da
IEP (calculated)
7.653
GRAVY (calculated)
-0.799
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYRRKQQGP VASDDRRTPQ PQGSAASSYN YTSMDSMREP KVGLWGALAR KAKGILDEDA AAHKFEDYGK VPSTTRKPNS SDGAQAPQSR WSFDNYGGTR
101: SEPRKRSEAL AASVNQFGGR IKNALEEGLI IVDNKTSNII EETKKIQIRR KPNNSSSHMQ SPAADAFTPP SFSLNKVEAA QETQLKASRD VANAMATKAK
201: LVLRELKTVK ADLAFAKQRC TQLEEENKML RETKQKGVKI EEDDDLIRMQ LETLLAEKSR LAQENSMYAR ENRFLREIVD FHQFAAHNVV SFGDGNMKDS
301: KLEEDTNRAY TENMFPVVEA YLAQEEVSPV PSRPDSPILS PGESSSPASI VSVDNVVDSP RNVSKPNELV SDKD
101: SEPRKRSEAL AASVNQFGGR IKNALEEGLI IVDNKTSNII EETKKIQIRR KPNNSSSHMQ SPAADAFTPP SFSLNKVEAA QETQLKASRD VANAMATKAK
201: LVLRELKTVK ADLAFAKQRC TQLEEENKML RETKQKGVKI EEDDDLIRMQ LETLLAEKSR LAQENSMYAR ENRFLREIVD FHQFAAHNVV SFGDGNMKDS
301: KLEEDTNRAY TENMFPVVEA YLAQEEVSPV PSRPDSPILS PGESSSPASI VSVDNVVDSP RNVSKPNELV SDKD
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.