Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G069350.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 89.89 | 89.89 |
| TraesCS1D01G302400.1 | Wheat | nucleus | 64.52 | 53.38 |
| TraesCS1B01G313300.1 | Wheat | nucleus | 65.81 | 52.76 |
| TraesCS1A01G303000.2 | Wheat | nucleus | 63.44 | 51.75 |
| Zm00001d038509_P001 | Maize | mitochondrion | 35.05 | 30.64 |
| HORVU4Hr1G023340.2 | Barley | nucleus | 24.3 | 30.21 |
| EES19707 | Sorghum | nucleus | 34.62 | 28.8 |
| Zm00001d010623_P001 | Maize | plastid | 30.11 | 28.4 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G069370.1 | EnsemblPlantsGene:HORVU1Hr1G069370 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF4 | SEG:seg |
| UniParc:UPI000B472086 | UniProt:A0A287G3J4 | MapMan:20.2.4.4 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:484965642..484967334
Molecular Weight (calculated)
51087.2 Da
IEP (calculated)
5.352
GRAVY (calculated)
-0.820
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: RCMQDPVTML YTSTSSATND DSKSSPVKKD ETKQGLWGLL AQQAKVMLEE SSPTEDARSQ PPATSGGSPQ AQSRWSYDRV RKSESPTFQN GSEGPKFDMG
101: GHIKNALEEG LHAATMAESR TPAVVGRKLQ IRRKTCSVDM RVANLNLGTP EVMSPMMTDF ESPQIKASRD VANVMAAKVK LLQRELKTVN ADLAFSKERC
201: AQLEEETRLH RAGNHDHAAN EDLVYMHVVV GRPSLHRPFL LLKENACLLA AQIRQQLETL LAEKARLANE NTVYARENRF LREIVDLNQL NVVGLQQDII
301: EEEEEEEEYE EEEDAVNPEE ADHDTPATHG TAPSQSPSHH TDNVLASTPP SPRRRTDNVP VATPQSPSRR THNVAVPAPQ SPLGRTDNVP AAAPQSPLGR
401: TENAPVAAPH PPSPHTDNAP ESRSTDNSSS AAIADAESPM HRSSKEDSGS PHMPENAFQQ QQYHD
101: GHIKNALEEG LHAATMAESR TPAVVGRKLQ IRRKTCSVDM RVANLNLGTP EVMSPMMTDF ESPQIKASRD VANVMAAKVK LLQRELKTVN ADLAFSKERC
201: AQLEEETRLH RAGNHDHAAN EDLVYMHVVV GRPSLHRPFL LLKENACLLA AQIRQQLETL LAEKARLANE NTVYARENRF LREIVDLNQL NVVGLQQDII
301: EEEEEEEEYE EEEDAVNPEE ADHDTPATHG TAPSQSPSHH TDNVLASTPP SPRRRTDNVP VATPQSPSRR THNVAVPAPQ SPLGRTDNVP AAAPQSPLGR
401: TENAPVAAPH PPSPHTDNAP ESRSTDNSSS AAIADAESPM HRSSKEDSGS PHMPENAFQQ QQYHD
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.