Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G302400.1 | Wheat | nucleus | 85.44 | 86.65 |
| TraesCS1B01G313300.1 | Wheat | nucleus | 85.44 | 83.97 |
| HORVU1Hr1G069350.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 52.28 | 64.09 |
| HORVU1Hr1G069370.1 | Barley | cytosol, nucleus | 51.75 | 63.44 |
| Zm00001d038509_P001 | Maize | mitochondrion | 36.32 | 38.91 |
| EES19707 | Sorghum | nucleus | 37.37 | 38.1 |
| Zm00001d010623_P001 | Maize | plastid | 32.28 | 37.32 |
| TraesCS4A01G192700.1 | Wheat | nucleus | 23.51 | 35.73 |
| TraesCS1A01G128300.1 | Wheat | cytosol, plastid | 23.68 | 31.18 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 13.16 | 23.29 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G303000.2 | EnsemblPlantsGene:TraesCS1A01G303000 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF4 | SEG:seg |
| MapMan:20.2.4.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:496480139..496482334
Molecular Weight (calculated)
62064.5 Da
IEP (calculated)
5.272
GRAVY (calculated)
-0.903
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYRRKQGIQ RSNTFVEDNR QPSPGDSASP ATASPRATRF ADDSRRPDRS LAAQTLLASA ARGDMQALAD RFTASSSSSP RAARPADPVT SSSLRVSPRA
101: ARPADPATSS SLRVSPRAAR PADPITSTSP RASPRAGRQN DLFAQDPVTM LYTSTSSATN DDSKLSPVKK DETKQGLWGL LAQQAKAMLD ESAPAEDARS
201: QPLVTQAGSP QAQSRWSYDP VRKSESPTFQ NGSEGPKFDM GGHIKNALEE GLHAATMAES RTPAVVGRKL QIRRKTCSVD MRSAHLNLGT PELMSPMMTD
301: FESPQIKASR DVANVMAAKV KLLQRELKTV NADLAFSKER CAQLEEETRL HRAGNHDHAA NEDLVRKQLE TLLAEKARLA TENTVYAREN RFLREIVDLN
401: QLTVVGLQED IIEEEEEEEE YEEEEEEEYE EEEEEAEHDT PATKGTAPPQ PPSHHTNNVP VAAPQPPSRR TGNAAVPAPQ SPSRRTENAP VAAPQSPTRR
501: ADNVPVATPN PPSLCTDNAP ESRSTDNTAI GVAGSPMHRS PKEDEGSQQT NPIRDNCSPE KASQQQQCQD
101: ARPADPATSS SLRVSPRAAR PADPITSTSP RASPRAGRQN DLFAQDPVTM LYTSTSSATN DDSKLSPVKK DETKQGLWGL LAQQAKAMLD ESAPAEDARS
201: QPLVTQAGSP QAQSRWSYDP VRKSESPTFQ NGSEGPKFDM GGHIKNALEE GLHAATMAES RTPAVVGRKL QIRRKTCSVD MRSAHLNLGT PELMSPMMTD
301: FESPQIKASR DVANVMAAKV KLLQRELKTV NADLAFSKER CAQLEEETRL HRAGNHDHAA NEDLVRKQLE TLLAEKARLA TENTVYAREN RFLREIVDLN
401: QLTVVGLQED IIEEEEEEEE YEEEEEEEYE EEEEEAEHDT PATKGTAPPQ PPSHHTNNVP VAAPQPPSRR TGNAAVPAPQ SPSRRTENAP VAAPQSPTRR
501: ADNVPVATPN PPSLCTDNAP ESRSTDNTAI GVAGSPMHRS PKEDEGSQQT NPIRDNCSPE KASQQQQCQD
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.