Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038509_P001 | Maize | mitochondrion | 68.69 | 72.18 |
| TraesCS1D01G302400.1 | Wheat | nucleus | 37.75 | 37.54 |
| TraesCS1A01G303000.2 | Wheat | nucleus | 38.1 | 37.37 |
| TraesCS1B01G313300.1 | Wheat | nucleus | 37.92 | 36.55 |
| EES16589 | Sorghum | mitochondrion, nucleus | 23.43 | 35.5 |
| HORVU1Hr1G069350.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 29.52 | 35.48 |
| HORVU1Hr1G069370.1 | Barley | cytosol, nucleus | 28.8 | 34.62 |
| OQU77734 | Sorghum | nucleus, plastid | 17.53 | 33.45 |
| EES11875 | Sorghum | cytosol, nucleus, plastid | 12.7 | 22.76 |
Protein Annotations
| EnsemblPlants:EES19707 | EnsemblPlantsGene:SORBI_3009G176200 | EntrezGene:8077013 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF4 |
| ProteinID:EES19707 | ProteinID:EES19707.1 | RefSeq:XP_002441277.1 | SEG:seg | UniParc:UPI0001A88EEB | UniProt:C5YZU9 |
| MapMan:20.2.4.4 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:53110066..53112427
Molecular Weight (calculated)
60551.2 Da
IEP (calculated)
4.954
GRAVY (calculated)
-0.947
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYRRKQGIQ RSATFVEDHR QTSSGGSASP AIASPRATRF ADDNRRPDRS SRLAAQAFVS SSAAREDLTL PSFGDRFPAA AAAASQCDAE PSSPVQDPVT
101: HLYTSTTSLN DEGPKYDIEL SKKDHKHGFW ALVAQKAKVM LDENGTPRAA QTQTSESRWS YDRVRSSESQ SPMSRRGSLD GRLDIGGKIK DVLEQEGLAV
201: ADGATSGTHG GVVAARKLQI RRKACSMDFR AANLTPASPD TSPMLADTES PQIKASRDVA NAMAAKVKLL QRELKTVKAD LAFSKERCAQ LEEENRLLRD
301: GNHDADADED LIRQQLETLV AEKARLAHEN TVYARENRFL REIVEYHQLN MQDVVNLDDD DIEEEDDYDV EDEDAELEAE HHQDRCKSPP SQLELEEEEH
401: RAADPATEPQ SPSRHRESPR MLSTNSGGSG GGGGTPDHES PRMMNTNSGG GGGTPDHESP RILNTNSGGG GTPEHESPRM LNTNSGGTPD HESPRMLNTN
501: SGGTPGHESP RMLNTNSGVG IAASESPRML STNSGGNTNE SPRSFKADDG SSPETTRDG
101: HLYTSTTSLN DEGPKYDIEL SKKDHKHGFW ALVAQKAKVM LDENGTPRAA QTQTSESRWS YDRVRSSESQ SPMSRRGSLD GRLDIGGKIK DVLEQEGLAV
201: ADGATSGTHG GVVAARKLQI RRKACSMDFR AANLTPASPD TSPMLADTES PQIKASRDVA NAMAAKVKLL QRELKTVKAD LAFSKERCAQ LEEENRLLRD
301: GNHDADADED LIRQQLETLV AEKARLAHEN TVYARENRFL REIVEYHQLN MQDVVNLDDD DIEEEDDYDV EDEDAELEAE HHQDRCKSPP SQLELEEEEH
401: RAADPATEPQ SPSRHRESPR MLSTNSGGSG GGGGTPDHES PRMMNTNSGG GGGTPDHESP RILNTNSGGG GTPEHESPRM LNTNSGGTPD HESPRMLNTN
501: SGGTPGHESP RMLNTNSGVG IAASESPRML STNSGGNTNE SPRSFKADDG SSPETTRDG
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.