Subcellular Localization
min:
: max
Winner_takes_all: nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044674_P003 | Maize | mitochondrion, nucleus | 80.76 | 78.84 |
| Os12t0118200-01 | Rice | nucleus | 47.7 | 70.4 |
| Os11t0118800-01 | Rice | nucleus | 66.94 | 66.4 |
| HORVU4Hr1G023340.2 | Barley | nucleus | 59.89 | 59.09 |
| TraesCS4B01G122600.2 | Wheat | nucleus | 58.54 | 57.6 |
| TraesCS4D01G120600.1 | Wheat | nucleus | 56.37 | 55.47 |
| TraesCS4A01G192700.1 | Wheat | nucleus | 55.28 | 54.4 |
| GSMUA_Achr4P10350_001 | Banana | nucleus | 31.98 | 42.75 |
| OQU77734 | Sorghum | nucleus, plastid | 28.73 | 36.18 |
| GSMUA_Achr1P24410_001 | Banana | nucleus | 38.75 | 33.81 |
| EES11875 | Sorghum | cytosol, nucleus, plastid | 22.76 | 26.92 |
| EES19707 | Sorghum | nucleus | 35.5 | 23.43 |
Protein Annotations
| EnsemblPlants:EES16589 | EnsemblPlantsGene:SORBI_3008G025900 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF5 | ProteinID:EES16589 |
| ProteinID:EES16589.2 | SEG:seg | UniParc:UPI00081AD1FE | UniProt:C5YR65 | MapMan:20.2.4.4 | : |
Description
hypothetical protein
Coordinates
chr8:+:2332293..2335539
Molecular Weight (calculated)
40731.9 Da
IEP (calculated)
5.053
GRAVY (calculated)
-0.863
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYRRKQGAA AADDRRSSYP QDSASSHGYT SFKSIDEPKL GLWQTLASKA KGILDDDGLA HKFEDLRKER PRSNTTTASS KDQAPNNSRW SFENHWKAGD
101: AASRIRPEAL SASVNQLSGK IKNAFEEGLT IVDNKTSSII EETKKIQIRR KPAGSSTYVP NSAVDTNTLS TPNLSLRQPE SAAQETGLKA SRDVANAMAA
201: KAKLLLRELK SVKADLAFAK QRCAQLEEEN KLLRETKQKG SKTEEDDDLI RVQLETLLAE KSRLAQENST YARENRFLRE IVDFHQFTTQ DVVSLNDGDM
301: EDSEPEEDND IICAQNVLPV IEENSVDEEH SPVPSRPESP MVNPGDPSST KSSNSHDASK PDADVSDVA
101: AASRIRPEAL SASVNQLSGK IKNAFEEGLT IVDNKTSSII EETKKIQIRR KPAGSSTYVP NSAVDTNTLS TPNLSLRQPE SAAQETGLKA SRDVANAMAA
201: KAKLLLRELK SVKADLAFAK QRCAQLEEEN KLLRETKQKG SKTEEDDDLI RVQLETLLAE KSRLAQENST YARENRFLRE IVDFHQFTTQ DVVSLNDGDM
301: EDSEPEEDND IICAQNVLPV IEENSVDEEH SPVPSRPESP MVNPGDPSST KSSNSHDASK PDADVSDVA
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Arabidopsis Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
SUBAcon: [nucleus,mitochondrion]
SUBAcon: [nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.