Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11875 | Sorghum | cytosol, nucleus, plastid | 69.18 | 70.51 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 66.04 | 65.22 |
| Zm00001d004133_P001 | Maize | cytosol | 66.04 | 65.02 |
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 65.41 | 63.41 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 63.84 | 63.24 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 45.6 | 43.94 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 45.28 | 42.23 |
| Solyc06g008980.2.1 | Tomato | nucleus | 42.77 | 40.96 |
| PGSC0003DMT400037917 | Potato | nucleus | 42.45 | 40.54 |
| KRH67202 | Soybean | nucleus, plastid | 41.51 | 40.12 |
| AT4G02800.1 | Thale cress | nucleus | 41.82 | 39.94 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 41.2 | 39.94 |
| KRG95525 | Soybean | nucleus, plastid | 42.14 | 39.41 |
| CDY17988 | Canola | nucleus | 41.51 | 39.17 |
| CDX90923 | Canola | nucleus, plastid | 39.94 | 38.84 |
| Os11t0118800-01 | Rice | nucleus | 24.84 | 21.24 |
| Os12t0118200-01 | Rice | nucleus | 16.04 | 20.4 |
| Os05t0315200-01 | Rice | plasma membrane | 26.1 | 19.81 |
Protein Annotations
| EnsemblPlants:Os04t0228100-01 | EnsemblPlantsGene:Os04g0228100 | EntrezGene:4335220 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 |
| ProteinID:BAF14202.1 | ProteinID:BAS88218.1 | ProteinID:CAE01959.2 | ProteinID:CAE05680.1 | ProteinID:EAZ29406.1 | RefSeq:XP_015634555.1 |
| SEG:seg | UniParc:UPI00001B0F60 | UniProt:Q7X6C4 | MapMan:20.2.4.4 | : | : |
Description
Similar to H0209A05.2 protein. (Os04t0228100-01)
Coordinates
chr4:-:8586491..8588227
Molecular Weight (calculated)
34993.7 Da
IEP (calculated)
4.390
GRAVY (calculated)
-0.690
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATAPLLSP ASDDRFWDRL RTRVDTILED RRLVAPPAAT CGVESERGKR LREDSLMLVR GLDSVAASLA QLSDTLTAAQ KGVNALATCS SQARECERGD
101: EEEEPKAKRR CSLAETVSFD GETPVAGADS GEGSEKEELA ADAKLRQENG GIQATSEVAK STNLKRARNL AVSMAGRAAA LARELKNIKS ELHFMQERCG
201: LLEEENKRLR EGYDNGVPPE EDDLVRLQLE ALLAEKSRLA QENANLSREN QSLIQLVEYH QLTSQDLAES YEDVMEGMRL DFSSPLGKID SDEEGERENR
301: RVAVTPSDKL EALESSDE
101: EEEEPKAKRR CSLAETVSFD GETPVAGADS GEGSEKEELA ADAKLRQENG GIQATSEVAK STNLKRARNL AVSMAGRAAA LARELKNIKS ELHFMQERCG
201: LLEEENKRLR EGYDNGVPPE EDDLVRLQLE ALLAEKSRLA QENANLSREN QSLIQLVEYH QLTSQDLAES YEDVMEGMRL DFSSPLGKID SDEEGERENR
301: RVAVTPSDKL EALESSDE
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Arabidopsis Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.