Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g008980.2.1 | Tomato | nucleus | 95.2 | 95.48 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 54.95 | 53.67 |
| KRH67202 | Soybean | nucleus, plastid | 51.65 | 52.28 |
| KRG95525 | Soybean | nucleus, plastid | 53.15 | 52.06 |
| AT4G02800.1 | Thale cress | nucleus | 47.15 | 47.15 |
| CDX90923 | Canola | nucleus, plastid | 45.65 | 46.48 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 45.65 | 46.34 |
| CDY17988 | Canola | nucleus | 46.55 | 45.99 |
| Os04t0228100-01 | Rice | nucleus | 40.54 | 42.45 |
| EES11875 | Sorghum | cytosol, nucleus, plastid | 37.24 | 39.74 |
| Zm00001d004133_P001 | Maize | cytosol | 38.14 | 39.32 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 37.84 | 39.25 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 37.24 | 38.51 |
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 37.24 | 37.8 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 37.24 | 37.58 |
| PGSC0003DMT400096244 | Potato | mitochondrion | 18.92 | 26.47 |
| PGSC0003DMT400071259 | Potato | extracellular, golgi | 12.01 | 20.62 |
| PGSC0003DMT400071236 | Potato | nucleus, plastid | 20.12 | 20.3 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400037917 | EnsemblPlantsGene:PGSC0003DMG400014626 | EntrezGene:102581664 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 |
| PGSC:PGSC0003DMG400014626 | RefSeq:XP_006355795.1 | SEG:seg | UniParc:UPI000296F456 | UniProt:M1B646 | MapMan:20.2.4.4 |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014626]
Coordinates
chr6:-:587436..591107
Molecular Weight (calculated)
37265.2 Da
IEP (calculated)
4.632
GRAVY (calculated)
-0.946
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MTISVESSSP ASLNKGSSSL MGSSPIYSPS SDKRFWSNLR SRVDTLLENR ENHNPAQKQL DGAEDRSKRM KEDAMLLLRG FDSVSSSLSL LSDNLENALQ
101: GARDLAKPPT LTDILHCTME KAGRENQSKE GKHEGDEENE ETEEGNKGLK RKLDECSEDS QQDDDTKKEN GQVLKHIGKF KKAKNLAISM ASKAATLARE
201: LKSMRSDLRF MQERSALLEE ENRRLRDGFD TGIPPEEDDL VRLQMEALLA EKSRFANENA NLNRENQCLR QLVEYHQLAS EDLSASYEGL LRGMGLDISC
301: SPEEHTEAND GSGAREKDLY GISKSLDDIY DDE
101: GARDLAKPPT LTDILHCTME KAGRENQSKE GKHEGDEENE ETEEGNKGLK RKLDECSEDS QQDDDTKKEN GQVLKHIGKF KKAKNLAISM ASKAATLARE
201: LKSMRSDLRF MQERSALLEE ENRRLRDGFD TGIPPEEDDL VRLQMEALLA EKSRFANENA NLNRENQCLR QLVEYHQLAS EDLSASYEGL LRGMGLDISC
301: SPEEHTEAND GSGAREKDLY GISKSLDDIY DDE
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Arabidopsis Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.