Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17988 | Canola | nucleus | 72.07 | 71.22 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 68.47 | 69.51 |
| CDX90923 | Canola | nucleus, plastid | 64.26 | 65.44 |
| KRG95525 | Soybean | nucleus, plastid | 52.85 | 51.76 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 52.85 | 51.61 |
| KRH67202 | Soybean | nucleus, plastid | 48.95 | 49.54 |
| Solyc06g008980.2.1 | Tomato | nucleus | 47.15 | 47.29 |
| PGSC0003DMT400037917 | Potato | nucleus | 47.15 | 47.15 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 42.64 | 43.03 |
| Os04t0228100-01 | Rice | nucleus | 39.94 | 41.82 |
| EES11875 | Sorghum | cytosol, nucleus, plastid | 38.74 | 41.35 |
| Zm00001d004133_P001 | Maize | cytosol | 38.14 | 39.32 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 36.34 | 37.58 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 35.14 | 36.45 |
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 35.44 | 35.98 |
| AT5G01970.1 | Thale cress | mitochondrion, nucleus | 25.53 | 24.22 |
| AT2G30530.1 | Thale cress | nucleus | 24.32 | 21.83 |
| AT1G30050.1 | Thale cress | nucleus | 25.23 | 21.59 |
Protein Annotations
| MapMan:20.2.4.4 | EntrezGene:828171 | ProteinID:AAD15336.1 | ProteinID:AEE82231.1 | ArrayExpress:AT4G02800 | EnsemblPlantsGene:AT4G02800 |
| RefSeq:AT4G02800 | TAIR:AT4G02800 | RefSeq:AT4G02800-TAIR-G | EnsemblPlants:AT4G02800.1 | TAIR:AT4G02800.1 | EMBL:AY088172 |
| EMBL:BT029202 | ProteinID:CAB77765.1 | ncoils:Coil | GO:GO:0008150 | RefSeq:NP_567246.1 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 | UniProt:Q9SY05 | UniParc:UPI00000A8986 | SEG:seg |
Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
Coordinates
chr4:+:1249971..1251867
Molecular Weight (calculated)
37992.1 Da
IEP (calculated)
4.884
GRAVY (calculated)
-0.972
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.