Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g055670.1.1 | Tomato | cytosol | 12.25 | 69.35 |
| Bra005657.1-P | Field mustard | mitochondrion | 24.79 | 55.41 |
| PGSC0003DMT400096244 | Potato | mitochondrion | 35.04 | 51.68 |
| KRH40636 | Soybean | nucleus | 54.42 | 45.8 |
| Zm00001d010455_P013 | Maize | plastid | 48.15 | 45.19 |
| VIT_08s0056g00430.t01 | Wine grape | nucleus | 53.85 | 44.26 |
| PGSC0003DMT400071236 | Potato | nucleus, plastid | 41.6 | 44.24 |
| Solyc10g074800.1.1 | Tomato | nucleus, plastid | 41.03 | 44.17 |
| KRH00520 | Soybean | nucleus | 52.42 | 43.4 |
| AT1G30050.1 | Thale cress | nucleus | 47.86 | 43.19 |
| CDY11166 | Canola | cytosol | 19.37 | 43.04 |
| PGSC0003DMT400071259 | Potato | extracellular, golgi | 22.79 | 41.24 |
| Os05t0315200-01 | Rice | plasma membrane | 47.58 | 39.86 |
| KRH64858 | Soybean | nucleus | 42.45 | 39.01 |
| OQU77734 | Sorghum | nucleus, plastid | 32.19 | 38.57 |
| GSMUA_Achr3P09690_001 | Banana | mitochondrion | 46.15 | 38.3 |
| TraesCS1A01G128300.1 | Wheat | cytosol, plastid | 46.44 | 37.64 |
| TraesCS1D01G124900.2 | Wheat | nucleus | 46.44 | 37.64 |
| KRH09568 | Soybean | nucleus | 40.46 | 37.08 |
| AT2G30530.1 | Thale cress | nucleus | 39.03 | 36.93 |
| TraesCS1B01G146700.2 | Wheat | mitochondrion | 46.72 | 35.73 |
| GSMUA_Achr8P21430_001 | Banana | mitochondrion | 45.3 | 34.87 |
| AT4G02800.1 | Thale cress | nucleus | 24.22 | 25.53 |
Protein Annotations
| MapMan:20.2.4.4 | EntrezGene:830706 | ProteinID:AED90415.1 | ArrayExpress:AT5G01970 | EnsemblPlantsGene:AT5G01970 | RefSeq:AT5G01970 |
| TAIR:AT5G01970 | RefSeq:AT5G01970-TAIR-G | EnsemblPlants:AT5G01970.1 | TAIR:AT5G01970.1 | EMBL:AY072408 | EMBL:BT000237 |
| ProteinID:CAB82970.1 | ncoils:Coil | RefSeq:NP_195817.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF6 | UniProt:Q9LZN4 |
| UniParc:UPI00000AC683 | SEG:seg | : | : | : | : |
Description
Heat-inducible transcription repressor [Source:UniProtKB/TrEMBL;Acc:Q9LZN4]
Coordinates
chr5:-:372905..375154
Molecular Weight (calculated)
39571.5 Da
IEP (calculated)
6.812
GRAVY (calculated)
-0.799
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYRRRQGIG KFATFKEEVD RLPPESITAV KDRSPPARSS PAFDQPRSKN FTTEPKGLWG VIAQKAKSVI EDDKSSDRST TASQSRFSYL SDEGFKKMDN
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
101: PKLRRGLDKL TSSLNQIGDT FEKAFEDGRT LVENKTADII QETRKLQTRR RGTGGEDENQ NQSYGVSSSW KKSPEQPMQL NHIEHETQLK ASRDVAMATA
201: AKAKLLLREL KTVKADLAFA KERCAQLEEE NKHLRESHRE KGSNPADEDL IRLQLESLLA EKARLAHENS VYARENRFLR EIVEYHQLTM QDVVYIDEGS
301: EEVTQVSPFV STLMTSSPAD RSQSPPSQEM IKEMLVVAEE SSVCASVVSV S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.