Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 86.29 | 84.45 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 82.55 | 82.3 |
| Os04t0228100-01 | Rice | nucleus | 63.24 | 63.84 |
| EES11875 | Sorghum | cytosol, nucleus, plastid | 57.63 | 59.29 |
| Zm00001d004133_P001 | Maize | cytosol | 54.83 | 54.49 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 39.56 | 38.48 |
| PGSC0003DMT400037917 | Potato | nucleus | 39.25 | 37.84 |
| Solyc06g008980.2.1 | Tomato | nucleus | 38.94 | 37.65 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 39.25 | 36.95 |
| KRH67202 | Soybean | nucleus, plastid | 37.69 | 36.78 |
| KRG95525 | Soybean | nucleus, plastid | 38.32 | 36.18 |
| AT4G02800.1 | Thale cress | nucleus | 36.45 | 35.14 |
| CDX90923 | Canola | nucleus, plastid | 34.27 | 33.64 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 34.27 | 33.54 |
| CDY17988 | Canola | nucleus | 35.2 | 33.53 |
| TraesCS4D01G120600.1 | Wheat | nucleus | 23.99 | 20.53 |
| TraesCS1D01G124900.2 | Wheat | nucleus | 22.74 | 16.86 |
| TraesCS1D01G302400.1 | Wheat | nucleus | 23.36 | 13.35 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G065700.1 | EnsemblPlantsGene:TraesCS2D01G065700 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 | SEG:seg |
| MapMan:20.2.4.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:27906208..27907575
Molecular Weight (calculated)
34677.3 Da
IEP (calculated)
4.306
GRAVY (calculated)
-0.511
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSAAASSLV VSPASDDRFW DGLRTRVDTI LEDRRLVASA ASTCAVASGR PKRLREDSLM LVRGLDSVAA SLAQLSDTLT AAQKGVNALA MCSSQARERE
101: RGEEEPDAKR HCTASTEFAT LEAQKDVNEG SDNGAGDAKP REGPDGDAVL ASAEVAQSTN LKRARSLAVS MAGRAANLAR ELTTIKSELR FMQERCGLLE
201: EENRRLRDGY DDGGAAPEED DLVRLQLEAL LAEKSRLAQE NANLARENQS LVQLVEYHQL TAQEEEEEEL EDHLLTASYE EAVMQGMRLD FSSPLGKIDG
301: EFDGVPATPG SKLGVLVSPD E
101: RGEEEPDAKR HCTASTEFAT LEAQKDVNEG SDNGAGDAKP REGPDGDAVL ASAEVAQSTN LKRARSLAVS MAGRAANLAR ELTTIKSELR FMQERCGLLE
201: EENRRLRDGY DDGGAAPEED DLVRLQLEAL LAEKSRLAQE NANLARENQS LVQLVEYHQL TAQEEEEEEL EDHLLTASYE EAVMQGMRLD FSSPLGKIDG
301: EFDGVPATPG SKLGVLVSPD E
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Arabidopsis Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.