Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037917 | Potato | nucleus | 95.48 | 95.2 |
| VIT_07s0104g00500.t01 | Wine grape | nucleus | 54.82 | 53.37 |
| KRH67202 | Soybean | nucleus, plastid | 51.81 | 52.28 |
| KRG95525 | Soybean | nucleus, plastid | 53.01 | 51.76 |
| AT4G02800.1 | Thale cress | nucleus | 47.29 | 47.15 |
| CDX90923 | Canola | nucleus, plastid | 46.08 | 46.79 |
| Bra000862.1-P | Field mustard | nucleus, plastid | 45.78 | 46.34 |
| CDY17988 | Canola | nucleus | 45.78 | 45.1 |
| Os04t0228100-01 | Rice | nucleus | 40.96 | 42.77 |
| Solyc09g055670.1.1 | Tomato | cytosol | 7.53 | 40.32 |
| EES11875 | Sorghum | cytosol, nucleus, plastid | 37.35 | 39.74 |
| Zm00001d004133_P001 | Maize | cytosol | 38.55 | 39.63 |
| TraesCS2D01G065700.1 | Wheat | cytosol, nucleus, plastid | 37.65 | 38.94 |
| TraesCS2A01G067400.1 | Wheat | cytosol | 37.35 | 38.51 |
| TraesCS2B01G079600.1 | Wheat | cytosol, nucleus, plastid | 37.35 | 37.8 |
| GSMUA_Achr8P13100_001 | Banana | nucleus | 37.05 | 37.27 |
| Solyc09g055590.2.1 | Tomato | nucleus | 19.28 | 33.68 |
| Solyc10g074800.1.1 | Tomato | nucleus, plastid | 20.78 | 21.17 |
Protein Annotations
| EnsemblPlants:Solyc06g008980.2.1 | EnsemblPlantsGene:Solyc06g008980.2 | ncoils:Coil | PANTHER:PTHR31016 | PANTHER:PTHR31016:SF2 | SEG:seg |
| UniParc:UPI0002766B02 | UniProt:K4C3S8 | MapMan:20.2.4.4 | : | : | : |
Description
No Description!
Coordinates
chr6:+:2920667..2924085
Molecular Weight (calculated)
37181.2 Da
IEP (calculated)
4.678
GRAVY (calculated)
-0.920
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MTISVESSSP ASLNKGSPSL MGSSPIYSPS SDKRFWSNLR SRVDTLLENR ENHNPAQKLD GAEDRSKRMK EDAMLLLRGF DSVSSSLSLL SDNLENALQG
101: ARDLAKPPTL TDILHCTMEK ASRENQSKEG KHEGDEEKEE TEEGNKGLKR KLDECSEDSQ QDDDTKKENG QVLKHIGKFK KAKNLAISMA SKAATLAREL
201: KSVRSDLRFM QERSALLEEE NRRLRDGFDT GIPPEEDDLV RLQMEALLAE KSRLANENAN LNRENQCLRQ LVEYHQLASE DLSASYEGLL RGMGLEISCS
301: PEEHTEANDV SGAREKDLYG ISKSLDDIYD DE
101: ARDLAKPPTL TDILHCTMEK ASRENQSKEG KHEGDEEKEE TEEGNKGLKR KLDECSEDSQ QDDDTKKENG QVLKHIGKFK KAKNLAISMA SKAATLAREL
201: KSVRSDLRFM QERSALLEEE NRRLRDGFDT GIPPEEDDLV RLQMEALLAE KSRLANENAN LNRENQCLRQ LVEYHQLASE DLSASYEGLL RGMGLEISCS
301: PEEHTEANDV SGAREKDLYG ISKSLDDIYD DE
001: MAASVETPSP NHTNNEGTRL NMVSATSFDS SSPSVSPSSD KRLWSNVRNR VDVLLEENSK NHKPVTNTIA IESERSKRFK NDSMLLLKGF DSVSHTLSLL
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
101: SSNLDNALQG VRELAKPPSY SEILHSNLKA DQIQRQQKEE DEEEEESKGK KRKHESDVEQ TEDSSNEEEK RPKERKIMKK AKNIAISMAA KANSLARELK
201: TIKSDLSFIQ ERCGLLEEEN KRLRDGFVKG VRPEEDDLVR LQLEVLLAEK ARLANENANL VRENQCLHQM VEYHQITSQD LSPSYEQVVQ GFCLDFSSPL
301: PQYDDEEEEH ETRARDVSKA LNESFEKAEE EQY
Arabidopsis Description
At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.