Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G006080.1 | Barley | nucleus, plastid | 71.15 | 72.2 |
| HORVU3Hr1G068240.1 | Barley | mitochondrion, nucleus, plastid | 27.4 | 61.96 |
| Solyc06g084430.2.1 | Tomato | plasma membrane | 22.12 | 47.42 |
| HORVU2Hr1G043860.1 | Barley | nucleus | 25.96 | 40.0 |
| HORVU6Hr1G005940.1 | Barley | nucleus | 34.13 | 39.23 |
| HORVU7Hr1G100400.1 | Barley | nucleus | 32.69 | 33.83 |
| HORVU1Hr1G035130.3 | Barley | nucleus | 25.96 | 31.58 |
| CDY51246 | Canola | plastid | 25.96 | 24.55 |
| HORVU2Hr1G043840.1 | Barley | mitochondrion | 6.25 | 18.06 |
| HORVU6Hr1G003750.1 | Barley | nucleus | 7.69 | 12.5 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.2 | UniProt:A0A287T880 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0046982 | EnsemblPlantsGene:HORVU6Hr1G006120 | EnsemblPlants:HORVU6Hr1G006120.1 | InterPro:Histone-fold |
| InterPro:Histone_H2A | InterPro:Histone_H2A_C | InterPro:IPR009072 | PFAM:PF16211 | PRINTS:PR00620 | PANTHER:PTHR23430 |
| PANTHER:PTHR23430:SF193 | SMART:SM00414 | SUPFAM:SSF47113 | UniParc:UPI000B465643 | SEG:seg | : |
Description
Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A287T880]
Coordinates
chrchr6H:-:13448444..13449373
Molecular Weight (calculated)
23152.1 Da
IEP (calculated)
12.516
GRAVY (calculated)
-1.127
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: PQTQSIRSST PPPTPHLVSP RRRSSSKQED GRKEGRRQEE GGDPVREGRA PVPRRPHRAL PQEGPLRPAR RLRRPRLPRR RPRVPRRRGT RRSSPSSTVL
101: LPCSSRARRK TDRFRFGSQV LELAGNAAKD NKKTRIIPRH LLLAVRNDQE LGRLLAGVTI AHGGVIPNIN SVLLPKKSAA AAEKEATKSP KKKAATKSPK
201: KKAPATKE
101: LPCSSRARRK TDRFRFGSQV LELAGNAAKD NKKTRIIPRH LLLAVRNDQE LGRLLAGVTI AHGGVIPNIN SVLLPKKSAA AAEKEATKSP KKKAATKSPK
201: KKAPATKE
001: MESTGKVKKA FGGRKPPGAP KTKSVSKSMK AGLQFPVGRI TRFLKKGRYA QRLGGGAPVY MAAVLEYLAA EVLELAGNAA RDNKKSRIIP RHLLLAIRND
101: EELGKLLSGV TIAHGGVLPN INSVLLPKKS ATKPAEEKAT KSPVKSPKKA
101: EELGKLLSGV TIAHGGVLPN INSVLLPKKS ATKPAEEKAT KSPVKSPKKA
Arabidopsis Description
HTA6Probable histone H2A.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJE8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.