Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009350_P001 | Maize | cytosol | 53.22 | 79.13 |
| Zm00001d027775_P001 | Maize | cytosol, extracellular, mitochondrion, nucleus | 52.63 | 77.59 |
| VIT_09s0002g05770.t01 | Wine grape | endoplasmic reticulum, extracellular | 57.31 | 77.17 |
| Zm00001d033146_P001 | Maize | cytosol | 51.46 | 75.86 |
| Zm00001d009769_P001 | Maize | cytosol, extracellular, nucleus | 51.46 | 75.86 |
| CDX99552 | Canola | plastid | 50.29 | 68.25 |
| EES08219 | Sorghum | cytosol | 38.6 | 61.68 |
| AT4G13570.2 | Thale cress | cytoskeleton, cytosol, nucleus | 42.11 | 58.06 |
| Zm00001d052588_P001 | Maize | cytosol, nucleus, plastid | 57.31 | 49.75 |
| HORVU2Hr1G043860.1 | Barley | nucleus | 38.01 | 48.15 |
| HORVU2Hr1G043840.1 | Barley | mitochondrion | 18.13 | 43.06 |
| HORVU3Hr1G068240.1 | Barley | mitochondrion, nucleus, plastid | 21.64 | 40.22 |
| HORVU6Hr1G005940.1 | Barley | nucleus | 38.01 | 35.91 |
| Zm00001d011011_P001 | Maize | cytosol, nucleus, peroxisome | 56.14 | 31.17 |
| HORVU6Hr1G006080.1 | Barley | nucleus, plastid | 33.33 | 27.8 |
| HORVU6Hr1G006120.1 | Barley | nucleus | 31.58 | 25.96 |
| HORVU6Hr1G003750.1 | Barley | nucleus | 19.3 | 25.78 |
| HORVU7Hr1G100400.1 | Barley | nucleus | 26.9 | 22.89 |
| Zm00001d031574_P001 | Maize | endoplasmic reticulum | 48.54 | 21.39 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.2 | UniProt:A0A287F428 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0046982 | EnsemblPlantsGene:HORVU1Hr1G035130 | EnsemblPlants:HORVU1Hr1G035130.3 | InterPro:Histone-fold |
| InterPro:Histone_H2A | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2A_C | InterPro:IPR009072 | PFAM:PF00125 | PFAM:PF16211 |
| PRINTS:PR00620 | PANTHER:PTHR23430 | PANTHER:PTHR23430:SF105 | SMART:SM00414 | SUPFAM:SSF47113 | UniParc:UPI000B47639A |
| SEG:seg | : | : | : | : | : |
Description
Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A287F428]
Coordinates
chrchr1H:+:230088090..230089764
Molecular Weight (calculated)
18176.7 Da
IEP (calculated)
9.676
GRAVY (calculated)
-0.463
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: PKSHLVITLS LVAARPREER GSQVGGSASK GDGREGRQGA ACGEDDGGQG RCRQGQGQEE GACVPLLPRW DSEFPVGRIH RQLKQRVSAN GRVGATAAVY
101: SAAILEYLTA EVLELAGNAS KDLKVKRITP RHLQLAIRGD EELDTLIKGT IAGGGVIPHI HKSLINKTSK E
101: SAAILEYLTA EVLELAGNAS KDLKVKRITP RHLQLAIRGD EELDTLIKGT IAGGGVIPHI HKSLINKTSK E
001: MAGKGGKGLL AAKTTAAAAN KDSVKKKSIS RSSRAGIQFP VGRIHRQLKQ RVSAHGRVGA TAAVYTASIL EYLTAEVLEL AGNASKDLKV KRITPRHLQL
101: AIRGDEELDT LIKGTIAGGG VIPHIHKSLV NKVTKD
101: AIRGDEELDT LIKGTIAGGG VIPHIHKSLV NKVTKD
Arabidopsis Description
HTA8Probable histone H2A variant 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.