Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G057020.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 29.73 | 40.74 |
| HORVU2Hr1G027430.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 25.68 | 33.33 |
| HORVU4Hr1G057000.1 | Barley | plasma membrane | 32.43 | 26.97 |
| TraesCS7D01G491000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.68 | 25.33 |
| EER88740 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 25.68 | 25.0 |
| TraesCS7A01G504000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.68 | 25.0 |
| TraesCS7B01G411400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.68 | 25.0 |
| Zm00001d046834_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 25.68 | 25.0 |
| TraesCS7D01G491100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 25.68 | 24.68 |
| TraesCS7D01G491500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 24.32 | 23.68 |
| TraesCS7B01G411100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 24.32 | 23.38 |
| Os06t0651900-01 | Rice | extracellular, golgi, plasma membrane | 20.27 | 19.23 |
| HORVU7Hr1G113020.6 | Barley | plastid | 33.78 | 16.34 |
| HORVU1Hr1G017700.2 | Barley | plastid | 27.03 | 15.15 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G024460.1 | EnsemblPlantsGene:HORVU6Hr1G024460 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PMP3 |
| PANTHER:PTHR21659 | PANTHER:PTHR21659:SF33 | PFAM:PF01679 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B464DDD |
| UniProt:A0A287TLN4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:85748556..85748861
Molecular Weight (calculated)
8405.4 Da
IEP (calculated)
6.498
GRAVY (calculated)
0.036
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: GDVLLLLPVP RDHVCHPPPA PRLLLRTPPL RQMEFWINVL LTILGYLPGV LYAAYVMCSV DPDRVRRRGD SDDD
1: MGSETFLEII LAILLPPVGV FLRYGCGVEF WICLLLTILG YIPGIIYAIY VLVG
Arabidopsis Description
At2g38901/At2g38901 [Source:UniProtKB/TrEMBL;Acc:Q941D7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.