Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G491000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 78.21 | 81.33 |
| EER88740 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 78.21 | 80.26 |
| TraesCS7A01G504000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 78.21 | 80.26 |
| TraesCS7B01G411100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 76.92 | 77.92 |
| TraesCS7B01G411400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 74.36 | 76.32 |
| Zm00001d046834_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 74.36 | 76.32 |
| Os05t0122700-01 | Rice | endoplasmic reticulum, plasma membrane | 34.62 | 50.0 |
| Os07t0635900-01 | Rice | endoplasmic reticulum, plasma membrane | 33.33 | 46.43 |
| Os03t0286900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 32.05 | 46.3 |
| Os09t0558100-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 42.31 | 45.83 |
| Os06t0184800-01 | Rice | plasma membrane | 35.9 | 36.84 |
| Os03t0370600-00 | Rice | golgi, plasma membrane, vacuole | 29.49 | 35.94 |
| HORVU7Hr1G113020.6 | Barley | plastid | 51.28 | 26.14 |
| HORVU6Hr1G024460.1 | Barley | extracellular, plasma membrane | 19.23 | 20.27 |
Protein Annotations
| EMBL:AK108564 | EnsemblPlants:Os06t0651900-01 | EnsemblPlantsGene:Os06g0651900 | EntrezGene:4341694 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF21 | PFAM:PF01679 | ProteinID:BAF20144.1 |
| ProteinID:BAS98909.1 | ProteinID:EAZ37842.1 | RefSeq:XP_015643996.1 | ScanProsite:PS01309 | TMHMM:TMhelix | UniParc:UPI0000E128E1 |
| UniProt:Q0DAH9 | MapMan:35.2 | : | : | : | : |
Description
rare cold-inducible 2-9Uncharacterised protein family UPF0057 domain containing protein. (Os06t0651900-01)
Coordinates
chr6:+:26676696..26677651
Molecular Weight (calculated)
8506.4 Da
IEP (calculated)
4.299
GRAVY (calculated)
0.744
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MSYSGGCSTC LETIFSVVLP PLGVFFRYGF CSSEFVVSSA LTALFYVPGI VYSVWVVILK TPPEPPGIDG ERPYYILA
1: MANGCEICCE IMIAILIPPL GVCLRHGCCT TEFMICLILT LLGYVPGIIY ALYAIVYVDR DQFFDEYRRP LFYAQSP
Arabidopsis Description
Low temperature and salt responsive protein family [Source:UniProtKB/TrEMBL;Acc:F4JKH9]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.