Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G491100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 33.99 | 67.53 |
| TraesCS7A01G504000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.33 | 67.11 |
| TraesCS7B01G411100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.33 | 66.23 |
| TraesCS7B01G411400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 32.68 | 65.79 |
| TraesCS7D01G491500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 32.03 | 64.47 |
| TraesCS7D01G491000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 31.37 | 64.0 |
| EER88740 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 27.45 | 55.26 |
| Zm00001d046834_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 26.14 | 52.63 |
| HORVU4Hr1G057020.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 18.3 | 51.85 |
| Os06t0651900-01 | Rice | extracellular, golgi, plasma membrane | 26.14 | 51.28 |
| HORVU2Hr1G027430.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 15.03 | 40.35 |
| HORVU6Hr1G024460.1 | Barley | extracellular, plasma membrane | 16.34 | 33.78 |
| HORVU4Hr1G057000.1 | Barley | plasma membrane | 17.65 | 30.34 |
| HORVU1Hr1G017700.2 | Barley | plastid | 15.69 | 18.18 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G113020.6 | EnsemblPlantsGene:HORVU7Hr1G113020 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PMP3 |
| PANTHER:PTHR21659 | PANTHER:PTHR21659:SF21 | PFAM:PF01679 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4648C1 |
| UniProt:A0A287XUK4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:636289766..636290553
Molecular Weight (calculated)
17062.0 Da
IEP (calculated)
11.260
GRAVY (calculated)
-0.159
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: LKPPPRWASG IFSPQPSSDS ASFLSPHRLA LLAGRRCLLG FKATTPPSSN NKAPATITEA RRQGQDELRR LLDVPGDHLR RRAAAARRLL PVRLVQRKQK
101: QPLLLLLQSE FFISLPLTML GYVPGIIYSV YVILKTPPEL PSIDGDRPYY ILA
101: QPLLLLLQSE FFISLPLTML GYVPGIIYSV YVILKTPPEL PSIDGDRPYY ILA
1: MPSNCEILCE IIIAILLPPL GVCFRKGCCT VEFLICLVLT ILGYVPGIIY AIYVIVFQHR EEYFDEYRRP IYSA
Arabidopsis Description
UPF0057 membrane protein At4g30660 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUI0]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.