Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G231500.1 | Wheat | cytosol | 79.59 | 84.02 |
| TraesCS7D01G327300.1 | Wheat | cytosol | 53.21 | 81.69 |
| TraesCS7D01G327500.1 | Wheat | cytosol | 58.95 | 81.59 |
| TraesCS7B01G231300.1 | Wheat | nucleus | 58.49 | 79.69 |
| TraesCS7D01G327200.1 | Wheat | nucleus | 66.97 | 64.6 |
| HORVU7Hr1G055280.2 | Barley | cytosol | 19.95 | 27.27 |
| HORVU7Hr1G079150.11 | Barley | cytosol, nucleus, plastid | 13.99 | 22.51 |
| HORVU2Hr1G012540.44 | Barley | cytosol | 18.81 | 19.48 |
| HORVU2Hr1G012520.2 | Barley | cytosol, nucleus | 17.66 | 17.82 |
| Os04t0652600-01 | Rice | nucleus | 22.25 | 17.7 |
| HORVU2Hr1G009710.27 | Barley | cytosol | 16.28 | 16.99 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G079070.2 | EnsemblPlantsGene:HORVU7Hr1G079070 | Gene3D:1.20.1300.20 | Gene3D:3.30.200.60 | InterPro:IPR003323 | InterPro:OTU_dom |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PFAM:PF10275 | PFscan:PS50802 | SEG:seg |
| SUPFAM:SSF54001 | UniParc:UPI000B47FA34 | UniProt:A0A287X118 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:465283787..465289583
Molecular Weight (calculated)
48630.2 Da
IEP (calculated)
4.457
GRAVY (calculated)
-0.581
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: EPSRSPALSV SRLLQPHRMA GSGGSPDADY PNCGGGGAEA SRTPQESDDR CSPPASPLST RPSGQPPGTS VVANEGSASS SAWGSDDDEE PTDRYKNPAA
101: PSTSTMGASS SSSSFSSDSW IGSDRTYGGA STSNSLDASN HMDFYRAPPS GWMYNQILES PFWSHEACDA VRPSWRDEYE YEACDDFSMV LQASQNGCEK
201: VLQKVNFSSL PHEFENEIMK DKAKKLSANY SEYRKIPRDG SCFYRSFIYS YLEQLVKVSH EEELRLLAAL EPMWEKFQRL QLPGSYSDLH NAFVGFILEC
301: MEQKQKPSVS GYQEWLFQES QNEQKFALSY LRLVTAIEIC TKFETFKPYI SDLDQGEPDA VEYCLRKVLP EKEDAEQVNL TALTNVLQVS LRVVNIDVTL
401: IAEPNIHIIY ESPDSSVPTV TLLYRPGHYD IIYEKS
101: PSTSTMGASS SSSSFSSDSW IGSDRTYGGA STSNSLDASN HMDFYRAPPS GWMYNQILES PFWSHEACDA VRPSWRDEYE YEACDDFSMV LQASQNGCEK
201: VLQKVNFSSL PHEFENEIMK DKAKKLSANY SEYRKIPRDG SCFYRSFIYS YLEQLVKVSH EEELRLLAAL EPMWEKFQRL QLPGSYSDLH NAFVGFILEC
301: MEQKQKPSVS GYQEWLFQES QNEQKFALSY LRLVTAIEIC TKFETFKPYI SDLDQGEPDA VEYCLRKVLP EKEDAEQVNL TALTNVLQVS LRVVNIDVTL
401: IAEPNIHIIY ESPDSSVPTV TLLYRPGHYD IIYEKS
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.