Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G327500.1 | Wheat | cytosol | 88.44 | 89.84 |
| TraesCS7B01G231500.1 | Wheat | cytosol | 89.38 | 69.25 |
| HORVU7Hr1G079070.2 | Barley | cytosol | 79.69 | 58.49 |
| TraesCS7B01G157400.1 | Wheat | cytosol | 57.5 | 44.88 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 15.94 | 15.99 |
| TraesCS2B01G089600.1 | Wheat | nucleus | 17.5 | 13.9 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 16.88 | 13.33 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 16.25 | 12.35 |
| Os04t0652600-01 | Rice | nucleus | 18.75 | 10.95 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 15.94 | 10.67 |
| TraesCS2B01G089100.1 | Wheat | nucleus | 7.81 | 8.31 |
| TraesCS2B01G089000.1 | Wheat | cytosol | 8.12 | 5.82 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G231300.1 | EnsemblPlantsGene:TraesCS7B01G231300 | Gene3D:1.20.1300.20 | Gene3D:3.30.200.60 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain |
| PANTHER:PTHR12931 | PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7B:-:433868476..433871824
Molecular Weight (calculated)
35142.7 Da
IEP (calculated)
4.131
GRAVY (calculated)
-0.764
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSGGSPDA DDPNCGGDGA EPSSTPQESD DRYSAPASPL STRPSGQPPG TSVVANEGST SSSAWGSDDD DEPADRYKNP ASASFLLGPS SCTMGASSSS
101: SSSDSWIGSD RTCGGASTSS SLDASNYRDL YRDPPSDWMY NQILEAPFWS HEASDAVRAS WRDEYEACDD LSMVLQTSQN GCEKILQKEP LSSLPHEFEN
201: EIMKDKAKKL SANYSEYRKV PGDGSCFYRS FIYSYLEQLV NVSHEEELRL LGALEPMWEK FQKLHLPGSY SDLHDAFAGF ILECMEQKQK LSVSGYQEWL
301: FQESQNEQKF ANSENIQQFS
101: SSSDSWIGSD RTCGGASTSS SLDASNYRDL YRDPPSDWMY NQILEAPFWS HEASDAVRAS WRDEYEACDD LSMVLQTSQN GCEKILQKEP LSSLPHEFEN
201: EIMKDKAKKL SANYSEYRKV PGDGSCFYRS FIYSYLEQLV NVSHEEELRL LGALEPMWEK FQKLHLPGSY SDLHDAFAGF ILECMEQKQK LSVSGYQEWL
301: FQESQNEQKF ANSENIQQFS
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.