Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G231500.1 | Wheat | cytosol | 62.2 | 61.74 |
| TraesCS7B01G231300.1 | Wheat | nucleus | 44.88 | 57.5 |
| HORVU7Hr1G079150.11 | Barley | cytosol, nucleus, plastid | 19.51 | 29.52 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 18.78 | 24.14 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 18.78 | 19.01 |
| TraesCS2B01G089600.1 | Wheat | nucleus | 18.29 | 18.61 |
| TraesCS2B01G089100.1 | Wheat | nucleus | 12.93 | 17.61 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 17.8 | 17.34 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 17.07 | 14.64 |
| Os04t0652600-01 | Rice | nucleus | 19.27 | 14.42 |
| TraesCS2B01G089000.1 | Wheat | cytosol | 13.66 | 12.53 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G157400.1 | EnsemblPlantsGene:TraesCS7B01G157400 | Gene3D:1.20.1300.20 | Gene3D:3.30.200.60 | InterPro:IPR003323 | InterPro:OTU_dom |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PFAM:PF10275 | PFscan:PS50802 | SEG:seg |
| SUPFAM:SSF54001 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:212776072..212780156
Molecular Weight (calculated)
45528.5 Da
IEP (calculated)
4.295
GRAVY (calculated)
-0.473
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSGGSPDA DDPNCGGDEA EPSRTPQESD DRYSAPASPL STRPSGQSPG TSVVANEGSA SSSATGSDDE DVPTDRYKNP AAASFLLGPS SSTMGASSSS
101: SSDSWIGSDR TCGGASTSSS LDASNYMGFY RNPPSEWMYT QILESSFGWN EYETCDDMRA YSGRDKYEPS QNFSSTIHQK APLSALAATL ISENMKAQTY
201: KLLANYSVYR EICPDGNCFY RSFIFSYLEQ LEASANEEQR LFCVLEPMGE KFQSLHWFDS YSDLHIAFVC FILECVEQTR ELSVSAYQDW LFQESQNEQK
301: FANILSYLRL VTAIEICSKA EKYKPFILDP GYKRNLVGYC RANVIPMKQE AEHINLFALT DVLQVPLQVV YIQDKPTEPN THIIYESPDS SVPTVTLLYR
401: PGHYDIIYEK
101: SSDSWIGSDR TCGGASTSSS LDASNYMGFY RNPPSEWMYT QILESSFGWN EYETCDDMRA YSGRDKYEPS QNFSSTIHQK APLSALAATL ISENMKAQTY
201: KLLANYSVYR EICPDGNCFY RSFIFSYLEQ LEASANEEQR LFCVLEPMGE KFQSLHWFDS YSDLHIAFVC FILECVEQTR ELSVSAYQDW LFQESQNEQK
301: FANILSYLRL VTAIEICSKA EKYKPFILDP GYKRNLVGYC RANVIPMKQE AEHINLFALT DVLQVPLQVV YIQDKPTEPN THIIYESPDS SVPTVTLLYR
401: PGHYDIIYEK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.