Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G072900.1 | Wheat | cytosol, mitochondrion, nucleus | 95.08 | 95.94 |
| TraesCS2A01G074000.1 | Wheat | cytosol | 89.71 | 91.55 |
| TraesCS2B01G089100.1 | Wheat | nucleus | 42.95 | 63.79 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 67.79 | 63.39 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 37.14 | 39.43 |
| OQU78677 | Sorghum | cytosol | 27.07 | 38.78 |
| Zm00001d023337_P010 | Maize | cytosol | 33.56 | 38.27 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 34.23 | 37.78 |
| TraesCS2B01G089600.1 | Wheat | nucleus | 33.56 | 37.22 |
| KXG22925 | Sorghum | nucleus | 37.14 | 36.24 |
| KXG22929 | Sorghum | nucleus | 35.35 | 31.66 |
| EES15642 | Sorghum | mitochondrion, nucleus | 34.68 | 31.31 |
| Zm00001d023339_P001 | Maize | plastid | 32.89 | 30.43 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 14.77 | 20.69 |
| TraesCS7B01G157400.1 | Wheat | cytosol | 12.53 | 13.66 |
| TraesCS7B01G231500.1 | Wheat | cytosol | 12.53 | 13.56 |
| TraesCS7B01G231300.1 | Wheat | nucleus | 5.82 | 8.12 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G089000.1 | EnsemblPlantsGene:TraesCS2B01G089000 | InterPro:IPR003323 | InterPro:OTU_dom | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain |
| PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 | PFAM:PF10275 | PFscan:PS50802 | SEG:seg | SUPFAM:SSF54001 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:50286965..50291485
Molecular Weight (calculated)
50515.0 Da
IEP (calculated)
5.561
GRAVY (calculated)
-0.524
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPKFRFKVK LFKDRAGSSG DGGGGRGGGE PTPPPAPGPA PSPSLDPAAL SASPLPLQPP PTPIVRYTHE GPDDDDDDWP EDDGADLDAV QEDEDEVPDD
101: EKFYIPLFMS GQKKNLPHDL FRHDSVPLNK NEYFSLRKNW NQLLDGKRTY LRPPRGRRVL SVSGVFRRPL ARPWALEFQE PLLDLAEDYP DNDIVQEMIK
201: ILCQRYVHLK RTRGDGSCFY RAFFFSYLEN LGQMQDSQAE VTRLMEHVAV SRENFCRLKW DKAYFLNPEE YFSSVASELN HLVNSVANGL SSDELQKRSL
301: QEMMPLRVIS LLRLLAETEI RTRIDDYKPF IPGKMNVNQY CWKEVRPLDV KASALAMRAL TYALGIPLRL ETLGEGLTAG GLQVKRFDFF PRSESGKGAF
401: HIVRSYWSST TTPEPLEIGS GNLISSDGTP LLTLLCRPDN CDILYRK
101: EKFYIPLFMS GQKKNLPHDL FRHDSVPLNK NEYFSLRKNW NQLLDGKRTY LRPPRGRRVL SVSGVFRRPL ARPWALEFQE PLLDLAEDYP DNDIVQEMIK
201: ILCQRYVHLK RTRGDGSCFY RAFFFSYLEN LGQMQDSQAE VTRLMEHVAV SRENFCRLKW DKAYFLNPEE YFSSVASELN HLVNSVANGL SSDELQKRSL
301: QEMMPLRVIS LLRLLAETEI RTRIDDYKPF IPGKMNVNQY CWKEVRPLDV KASALAMRAL TYALGIPLRL ETLGEGLTAG GLQVKRFDFF PRSESGKGAF
401: HIVRSYWSST TTPEPLEIGS GNLISSDGTP LLTLLCRPDN CDILYRK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.