CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023337_P010	Maize	cytosol	59.83	69.9
OQU78677	Sorghum	cytosol	38.43	56.41
EES15642	Sorghum	mitochondrion, nucleus	56.33	52.12
TraesCS2B01G089100.1	Wheat	nucleus	33.19	50.5
KXG22929	Sorghum	nucleus	53.93	49.5
TraesCS2D01G073000.2	Wheat	mitochondrion	40.39	45.23
TraesCS2A01G074100.1	Wheat	mitochondrion	39.52	44.69
TraesCS2D01G056000.1	Wheat	cytosol	42.14	43.27
HORVU2Hr1G009710.27	Barley	cytosol	39.3	43.06
TraesCS2B01G073500.1	Wheat	cytosol	41.92	40.17
TraesCS2D01G056200.1	Wheat	cytosol	40.39	39.19
TraesCS2B01G089800.1	Wheat	nucleus	36.03	39.19
TraesCS2A01G057400.1	Wheat	cytosol	29.26	39.18
TraesCS2D01G073100.1	Wheat	nucleus	33.41	37.87
TraesCS2B01G078500.1	Wheat	nucleus	33.41	37.78
TraesCS2B01G089000.1	Wheat	cytosol	36.24	37.14
TraesCS2B01G089600.1	Wheat	nucleus	32.31	36.72
TraesCS2D01G072900.1	Wheat	cytosol, mitochondrion, nucleus	35.37	36.57
TraesCS2A01G074000.1	Wheat	cytosol	34.72	36.3
HORVU2Hr1G012520.2	Barley	cytosol, nucleus	34.06	36.11
TraesCS2A01G074500.1	Wheat	nucleus	30.35	35.46
HORVU2Hr1G012540.44	Barley	cytosol	29.69	32.3
EES15282	Sorghum	cytosol	17.9	25.31
Os04t0652600-01	Rice	nucleus	22.05	18.43

Protein Annotations

EnsemblPlants:KXG22925	EnsemblPlantsGene:SORBI_3008G029500	Gene3D:1.20.1300.20	Gene3D:3.30.200.60	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C65_otubain
PANTHER:PTHR12931	PANTHER:PTHR12931:SF18	PFAM:PF10275	ProteinID:KXG22925	ProteinID:KXG22925.1	SEG:seg
SUPFAM:SSF54001	UniParc:UPI00081AE390	UniProt:A0A1B6PBS9	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr8:+:2635647..2641667

Molecular Weight (calculated)

50822.3 Da

IEP (calculated)

4.671

GRAVY (calculated)

-0.538

Length

458 amino acids

Sequence
(BLAST)

001: MAEKATPEKS ETPHKLTYKP SAGSSAGGGG GGGDGDSGAA PRPAPQPEPS SQRPPSPPPP DDDDDDDDDE DYEGFEDDEL EVLERRSGWG SLYTSDPQVL
101: CMDSSDPQNP PGYIGRQSCE PLTTQEFFSL RQNWQQLLDG KKTYLRPPKN NRVAKDNYAN CLFVTPEPLE KAIQCQVPVP LSDFVRAAAE NPTVQQKFKI
201: LSEHYVCIRQ MRIDGSSFYR AFLFSYLENL GKMQGSQDEV TRLMECVARS KENFCRLHWD SAYFSNPEAF FSSVVSEFEN LVNSVANGLN ADELYKRSLQ
301: EITSSRILCL LRLLTEVHIR THHADYVPAF EQTQALLFCI ASVRPFDAEA NTLQMSALSN ALGIPTHLAL VDGTMDNGIA QVKCFDFFPQ SESRVSTTSG
401: PLNLITSYCL SSATDKHPKQ GRDDSNSAMP AGNLLSSDHM PLVSLLSRPY RCDILYRK

Best Arabidopsis Sequence Match ( AT1G28120.1 )
(BLAST)

001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK

Arabidopsis Description

Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.