Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G056200.1 | Wheat | cytosol | 84.5 | 61.23 |
| TraesCS2D01G056000.1 | Wheat | cytosol | 77.78 | 59.64 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 82.16 | 58.79 |
| HORVU2Hr1G009710.27 | Barley | cytosol | 67.25 | 55.02 |
| TraesCS2A01G074000.1 | Wheat | cytosol | 56.73 | 44.29 |
| TraesCS2A01G074100.1 | Wheat | mitochondrion | 47.37 | 40.0 |
| OQU78677 | Sorghum | cytosol | 29.24 | 32.05 |
| Zm00001d023337_P010 | Maize | cytosol | 34.8 | 30.36 |
| KXG22925 | Sorghum | nucleus | 39.18 | 29.26 |
| KXG22929 | Sorghum | nucleus | 39.47 | 27.05 |
| EES15642 | Sorghum | mitochondrion, nucleus | 38.6 | 26.67 |
| TraesCS2A01G074500.1 | Wheat | nucleus | 29.24 | 25.51 |
| Zm00001d023339_P001 | Maize | plastid | 33.63 | 23.81 |
| TraesCS7A01G263900.1 | Wheat | cytosol | 16.67 | 17.87 |
| Os04t0652600-01 | Rice | nucleus | 18.71 | 11.68 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G057400.1 | EnsemblPlantsGene:TraesCS2A01G057400 | Gene3D:1.20.1300.20 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 |
| PANTHER:PTHR12931:SF18 | PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2A:-:24160906..24165690
Molecular Weight (calculated)
39319.6 Da
IEP (calculated)
4.189
GRAVY (calculated)
-0.734
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIKFKVKLY SDRAGSSGDG DAGPTPPPAP GLAPSPSLDP SAVSTSPPPL QPARQPPLTP IVKYTDEGPD VDDDWPEDED DDWPEDEDQG LDDDDWPEDE
101: DDEGWEVMQE DEDELPDEEK FYISLFMSAQ KKNLPHDLVR HDSVPLNKNE YFSLWENWNQ LLDGKRTYLR PPKDCRILSV SGVFRCPDAR PRTLGCKEPL
201: LDLVQDYPDN DIFQEIIKIL CQRYLHIRRT RGDGNYFYRA FFFSYLENLG QMQDSQAEVT RLMEHVAVSR ESFCRLKWDK AYFLNPEEYF SSVASELNHL
301: VNSVANGLSS DELYKRSLQE IMPLRIISLL RLLAETDPYS RS
101: DDEGWEVMQE DEDELPDEEK FYISLFMSAQ KKNLPHDLVR HDSVPLNKNE YFSLWENWNQ LLDGKRTYLR PPKDCRILSV SGVFRCPDAR PRTLGCKEPL
201: LDLVQDYPDN DIFQEIIKIL CQRYLHIRRT RGDGNYFYRA FFFSYLENLG QMQDSQAEVT RLMEHVAVSR ESFCRLKWDK AYFLNPEEYF SSVASELNHL
301: VNSVANGLSS DELYKRSLQE IMPLRIISLL RLLAETDPYS RS
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.