Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G056200.1 | Wheat | cytosol | 84.52 | 85.59 |
| TraesCS2A01G057400.1 | Wheat | cytosol | 58.79 | 82.16 |
| HORVU2Hr1G009710.27 | Barley | cytosol | 69.46 | 79.43 |
| TraesCS2B01G089100.1 | Wheat | nucleus | 42.89 | 68.11 |
| TraesCS2B01G089000.1 | Wheat | cytosol | 63.39 | 67.79 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 41.42 | 47.03 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 38.49 | 45.43 |
| OQU78677 | Sorghum | cytosol | 29.29 | 44.87 |
| TraesCS2B01G089600.1 | Wheat | nucleus | 37.66 | 44.66 |
| Zm00001d023337_P010 | Maize | cytosol | 35.36 | 43.11 |
| KXG22925 | Sorghum | nucleus | 40.17 | 41.92 |
| KXG22929 | Sorghum | nucleus | 38.49 | 36.87 |
| EES15642 | Sorghum | mitochondrion, nucleus | 37.66 | 36.36 |
| Zm00001d023339_P001 | Maize | plastid | 34.31 | 33.95 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 17.99 | 26.96 |
| TraesCS7B01G231500.1 | Wheat | cytosol | 15.69 | 18.16 |
| TraesCS7B01G157400.1 | Wheat | cytosol | 14.64 | 17.07 |
| TraesCS7B01G231300.1 | Wheat | nucleus | 10.67 | 15.94 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G073500.1 | EnsemblPlantsGene:TraesCS2B01G073500 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:39366773..39372200
Molecular Weight (calculated)
54647.8 Da
IEP (calculated)
4.237
GRAVY (calculated)
-0.663
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MGINFKVKLY SDRAGSSGGG DGDGGAGPTS PPAPGPAPSP SLDPALVSTS PLPLQPARRP PLTPIVKYTD EGPDIDDDWP EDEDKDEDED EDDDDEDEDQ
101: GLDDDGYDDW PEDEDDEGWE VMQEDQDELP DEEKFYISLF MSTQKKNLPH DLVRHDSVPL NKNEYFSLWE NWNQLLDGKR TYLRPPKDCR ILSVSGVFRC
201: PDARPRALGC QEPLLDLVQD YSDNDIFQEI IKVLCQRYLH FRRTRGDGNY FYRAFFFSYL ENLGQMQDSQ AEVTRLMEHV AVSRENFCRL KWDKAYFLNP
301: EEYFSSVVSE LNRLVNSVAN GLSSDELYKR SLQEMMPLRI ISLLRLLAET EIRTREADYK SFIPEKMNVH QYCYKEVRPL DVKPTMLAMR ALTYALGIPL
401: RLEILGRDLM AGDLQVKRLD FFPRSETGKG AFHMAQSYWS STSTPEPLEL GSGNLLSSDG TPSLTLLCRS EDCDILYR
101: GLDDDGYDDW PEDEDDEGWE VMQEDQDELP DEEKFYISLF MSTQKKNLPH DLVRHDSVPL NKNEYFSLWE NWNQLLDGKR TYLRPPKDCR ILSVSGVFRC
201: PDARPRALGC QEPLLDLVQD YSDNDIFQEI IKVLCQRYLH FRRTRGDGNY FYRAFFFSYL ENLGQMQDSQ AEVTRLMEHV AVSRENFCRL KWDKAYFLNP
301: EEYFSSVVSE LNRLVNSVAN GLSSDELYKR SLQEMMPLRI ISLLRLLAET EIRTREADYK SFIPEKMNVH QYCYKEVRPL DVKPTMLAMR ALTYALGIPL
401: RLEILGRDLM AGDLQVKRLD FFPRSETGKG AFHMAQSYWS STSTPEPLEL GSGNLLSSDG TPSLTLLCRS EDCDILYR
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.