Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G078500.1 | Wheat | nucleus | 71.97 | 74.81 |
| TraesCS2B01G089600.1 | Wheat | nucleus | 71.02 | 74.19 |
| HORVU2Hr1G012520.2 | Barley | cytosol, nucleus | 64.61 | 62.96 |
| HORVU2Hr1G012540.44 | Barley | cytosol | 53.21 | 53.21 |
| TraesCS2B01G089100.1 | Wheat | nucleus | 35.63 | 49.83 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 47.03 | 41.42 |
| OQU78677 | Sorghum | cytosol | 29.93 | 40.38 |
| Zm00001d023337_P010 | Maize | cytosol | 35.63 | 38.27 |
| TraesCS2B01G089000.1 | Wheat | cytosol | 39.43 | 37.14 |
| KXG22925 | Sorghum | nucleus | 39.19 | 36.03 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 23.75 | 31.35 |
| KXG22929 | Sorghum | nucleus | 37.05 | 31.26 |
| EES15642 | Sorghum | mitochondrion, nucleus | 35.87 | 30.51 |
| Zm00001d023339_P001 | Maize | plastid | 34.68 | 30.23 |
| TraesCS7B01G231500.1 | Wheat | cytosol | 19.48 | 19.85 |
| TraesCS7B01G157400.1 | Wheat | cytosol | 17.34 | 17.8 |
| TraesCS7B01G231300.1 | Wheat | nucleus | 12.35 | 16.25 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G089800.1 | EnsemblPlantsGene:TraesCS2B01G089800 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:50626233..50629810
Molecular Weight (calculated)
47476.1 Da
IEP (calculated)
4.762
GRAVY (calculated)
-0.596
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPKRKLDDL AQPSSSGGGG DDRPTKAPRL SPPPAQSPSR DQTAPPTSPP PLQPPGSPPP PADKDPVELE EGELEDDADS QEEAEDDQDS DEELGGSLPE
101: LALGTQEYLS LRETSSQFLD GKRTYLKPQK DCRILIGVFR CPDDRPTALG SEEQLAELVR ESPDNSIIQE KMKILSKHYV LFRRTRQDGS CFYRAFLFSY
201: MEILRQMQDK QAEVTRLMEC LEMYTDRFSR LKWDKAYFFN PEKYFSSVVS ELNEVLNVIA AGCTSEWLYK RSLQETFSGR IISFLRLLTE TEIRTEEFYK
301: QSIPQNLNVL QFCWKTVRSL DAEATTTQMR ALTYTLGIPL RVEVVDKSST GQGVLVKRLD FFHQADLNKG PLHLTRGYLS SSTAPKLLEE GGDDANLLSS
401: DGAPLLTLLC RRGHCDILYR K
101: LALGTQEYLS LRETSSQFLD GKRTYLKPQK DCRILIGVFR CPDDRPTALG SEEQLAELVR ESPDNSIIQE KMKILSKHYV LFRRTRQDGS CFYRAFLFSY
201: MEILRQMQDK QAEVTRLMEC LEMYTDRFSR LKWDKAYFFN PEKYFSSVVS ELNEVLNVIA AGCTSEWLYK RSLQETFSGR IISFLRLLTE TEIRTEEFYK
301: QSIPQNLNVL QFCWKTVRSL DAEATTTQMR ALTYTLGIPL RVEVVDKSST GQGVLVKRLD FFHQADLNKG PLHLTRGYLS SSTAPKLLEE GGDDANLLSS
401: DGAPLLTLLC RRGHCDILYR K
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.