Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G073100.1 | Wheat | nucleus | 92.31 | 92.08 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 90.82 | 90.37 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 74.19 | 71.02 |
| HORVU2Hr1G012520.2 | Barley | cytosol, nucleus | 71.71 | 66.9 |
| HORVU2Hr1G012540.44 | Barley | cytosol | 58.31 | 55.82 |
| TraesCS2B01G089100.1 | Wheat | nucleus | 35.24 | 47.18 |
| OQU78677 | Sorghum | cytosol | 29.28 | 37.82 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 44.66 | 37.66 |
| Zm00001d023337_P010 | Maize | cytosol | 32.75 | 33.67 |
| TraesCS2B01G089000.1 | Wheat | cytosol | 37.22 | 33.56 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 25.81 | 32.6 |
| KXG22925 | Sorghum | nucleus | 36.72 | 32.31 |
| EES15642 | Sorghum | mitochondrion, nucleus | 35.24 | 28.69 |
| KXG22929 | Sorghum | nucleus | 34.99 | 28.26 |
| Zm00001d023339_P001 | Maize | plastid | 32.26 | 26.92 |
| TraesCS7B01G231500.1 | Wheat | cytosol | 21.09 | 20.58 |
| TraesCS7B01G157400.1 | Wheat | cytosol | 18.61 | 18.29 |
| TraesCS7B01G231300.1 | Wheat | nucleus | 13.9 | 17.5 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G089600.1 | EnsemblPlantsGene:TraesCS2B01G089600 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:-:50485588..50489323
Molecular Weight (calculated)
44711.5 Da
IEP (calculated)
4.732
GRAVY (calculated)
-0.584
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPKREYDDL AQPSSAGSTG DDSGGGDARP TKAPRLPAAP PPPAQSPSRD QTGLPTSPSP LQPPGSPPPP ADKDPVELEE GELGDDEHSG EEEEDDQDSE
101: GELGGSRPDG RTDHALTGGF GCRHARPTAL GPQEQLSELV RESPDNSIIQ EKMKILSKHY VLFRRTRQDG SCFYRAFMFS YMEILRQMQD KQAEVTRLME
201: CLEMSKGRFS CLVWHKADFS IDPEEYFSSV VSELNEVLNV IAAGCTSEWL YQRSLQESFS GRIISLLRLL TETEIRTDEF YKQSIPKNLN VLQFCWKAVR
301: SLDAEATTTQ MRALTYALGI PLRVEVVDKS STDRGVLVKH LDFFHESDLE KGPLRLTPSY LSSSTAPIPL KQGSYDADLL SSDGTPMLAL LCRHGHCDIL
401: YRK
101: GELGGSRPDG RTDHALTGGF GCRHARPTAL GPQEQLSELV RESPDNSIIQ EKMKILSKHY VLFRRTRQDG SCFYRAFMFS YMEILRQMQD KQAEVTRLME
201: CLEMSKGRFS CLVWHKADFS IDPEEYFSSV VSELNEVLNV IAAGCTSEWL YQRSLQESFS GRIISLLRLL TETEIRTDEF YKQSIPKNLN VLQFCWKAVR
301: SLDAEATTTQ MRALTYALGI PLRVEVVDKS STDRGVLVKH LDFFHESDLE KGPLRLTPSY LSSSTAPIPL KQGSYDADLL SSDGTPMLAL LCRHGHCDIL
401: YRK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.