Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G012520.2 | Barley | cytosol, nucleus | 63.18 | 61.57 |
| TraesCS2A01G074500.1 | Wheat | nucleus | 55.34 | 59.44 |
| TraesCS2D01G073100.1 | Wheat | nucleus | 56.53 | 58.91 |
| TraesCS2B01G089600.1 | Wheat | nucleus | 55.82 | 58.31 |
| TraesCS2B01G078500.1 | Wheat | nucleus | 55.58 | 57.78 |
| TraesCS2B01G089800.1 | Wheat | nucleus | 53.21 | 53.21 |
| HORVU2Hr1G009710.27 | Barley | cytosol | 38.48 | 38.76 |
| OQU78677 | Sorghum | cytosol | 25.18 | 33.97 |
| Zm00001d023337_P010 | Maize | cytosol | 30.4 | 32.65 |
| HORVU7Hr1G055280.2 | Barley | cytosol | 22.8 | 30.09 |
| KXG22925 | Sorghum | nucleus | 32.3 | 29.69 |
| Zm00001d023339_P001 | Maize | plastid | 30.17 | 26.29 |
| EES15642 | Sorghum | mitochondrion, nucleus | 29.93 | 25.45 |
| KXG22929 | Sorghum | nucleus | 29.93 | 25.25 |
| HORVU7Hr1G079070.2 | Barley | cytosol | 19.48 | 18.81 |
| HORVU7Hr1G079150.11 | Barley | cytosol, nucleus, plastid | 9.98 | 15.5 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G012540.44 | EnsemblPlantsGene:HORVU2Hr1G012540 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | UniParc:UPI000B485CDB | UniProt:A0A287H3P8 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr2H:-:26375593..26380454
Molecular Weight (calculated)
48094.8 Da
IEP (calculated)
4.481
GRAVY (calculated)
-0.579
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: QXPTSAPPLQ TPGPSPRPAG NLQDEGPDDE DWQEVEDDEV ELEEGEIEDD ADPGEEEEDD QDSQGGSLPE LPLGTEDYPQ TLSQLLVGET YPDAYLKMEF
101: KPPINDRVVT GGLRCPDAYL GRPLLHGETY LKPPKDQFRC SDALPTVLGH VEQLSELVRE SPDNFIIQEK TKILSKHYVR FRRTLQDGSC FYRAFMFSYM
201: EILRHMQDKQ DEVTRLIECL DLSKDRFSRL RWHKADFSID PEKYFSRVVS ELEEVLNVIA AGCTSEWLYQ RSLQESFSGR VIPLLRLLTE TEIRTEKFYR
301: QYIPENLSVR EFCRKAVQSL DAEASTIQMR ALTFALGIPL RVEVVDNSLS DQGVLVKRLD FFRGTDWDKG PLRLTRGYLS SRTAPIQLKQ GSYDADLLSP
401: DGTPMLTLLC RRGHCDILYR K
101: KPPINDRVVT GGLRCPDAYL GRPLLHGETY LKPPKDQFRC SDALPTVLGH VEQLSELVRE SPDNFIIQEK TKILSKHYVR FRRTLQDGSC FYRAFMFSYM
201: EILRHMQDKQ DEVTRLIECL DLSKDRFSRL RWHKADFSID PEKYFSRVVS ELEEVLNVIA AGCTSEWLYQ RSLQESFSGR VIPLLRLLTE TEIRTEKFYR
301: QYIPENLSVR EFCRKAVQSL DAEASTIQMR ALTFALGIPL RVEVVDNSLS DQGVLVKRLD FFRGTDWDKG PLRLTRGYLS SRTAPIQLKQ GSYDADLLSP
401: DGTPMLTLLC RRGHCDILYR K
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.