Factsheet for Zm00001d023337_P010

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22925	Sorghum	nucleus	69.9	59.83
TraesCS2B01G089100.1	Wheat	nucleus	34.44	44.85
Zm00001d023339_P001	Maize	plastid	52.55	42.65
HORVU2Hr1G009710.27	Barley	cytosol	43.88	41.15
TraesCS2A01G074100.1	Wheat	mitochondrion	40.56	39.26
TraesCS2D01G073000.2	Wheat	mitochondrion	40.56	38.88
TraesCS2D01G056000.1	Wheat	cytosol	43.37	38.12
TraesCS2B01G089800.1	Wheat	nucleus	38.27	35.63
TraesCS2D01G056200.1	Wheat	cytosol	42.86	35.59
TraesCS2B01G073500.1	Wheat	cytosol	43.11	35.36
TraesCS2A01G057400.1	Wheat	cytosol	30.36	34.8
TraesCS2D01G073100.1	Wheat	nucleus	34.95	33.91
TraesCS2B01G078500.1	Wheat	nucleus	34.69	33.58
TraesCS2A01G074000.1	Wheat	cytosol	37.5	33.56
TraesCS2B01G089000.1	Wheat	cytosol	38.27	33.56
TraesCS2A01G074500.1	Wheat	nucleus	33.42	33.42
TraesCS2B01G089600.1	Wheat	nucleus	33.67	32.75
TraesCS2D01G072900.1	Wheat	cytosol, mitochondrion, nucleus	36.99	32.73
HORVU2Hr1G012520.2	Barley	cytosol, nucleus	34.18	31.02
HORVU2Hr1G012540.44	Barley	cytosol	32.65	30.4
Zm00001d049873_P001	Maize	cytosol, extracellular	19.64	24.21
Zm00001d031668_P001	Maize	cytosol	6.12	21.24
Os04t0652600-01	Rice	nucleus	22.45	16.06

Protein Annotations

EnsemblPlants:Zm00001d023337_P010	EnsemblPlants:Zm00001d023337_T010	EnsemblPlantsGene:Zm00001d023337	Gene3D:1.20.1300.20	Gene3D:3.30.200.60	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C65_otubain	PANTHER:PTHR12931	PANTHER:PTHR12931:SF18	PFAM:PF10275	ProteinID:AQK39160.1	SEG:seg
SUPFAM:SSF54001	UniParc:UPI0004DEBF7D	UniProt:A0A1D6ISV0	MapMan:35.1	:	:

Description

Ubiquitin thioesterase otubain-like

Coordinates

chr10:+:3652211..3660777

Molecular Weight (calculated)

44528.4 Da

IEP (calculated)

6.321

GRAVY (calculated)

-0.441

Length

392 amino acids

Sequence
(BLAST)

001: MIATHKDYEG FTDEELDKFE SAFGWGSTFL SDPQVLCMDS SDPQNPPRIG RQNYEPLTAQ EFFSLRHNWQ QLLDGKKTYL RPPKNNRVAK HSYANCTFVT
101: PEPLEKALQC QEPLSDFGRK YAENSIVQQK FKILSEHYAH VRQMRMDGSS FYRAFLFSYL ENLGKMQASH AEVTRLMECV ARSREKFCRL HWNDAYFSNP
201: EAFFSSVVSE FEQLVNSVAN GLNADELYKR SLHEITSSRI LCLFRLLTEV HIRTHHADYP EFSQETEALM FCLASVRPFE AGANILQMSA LSSALGIPLH
301: LACTDVTTSD DEIVTVKCFD LFPQSESGAS TTSGATSSIR SYSLSSTTDK HPEQGRDDNN STMPAGNLFS SDRMPLVILL SRKGQYGILY RK

Best Arabidopsis Sequence Match ( AT1G28120.1 )
(BLAST)

001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK

Arabidopsis Description

Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.