Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G056000.1 | Wheat | cytosol | 80.08 | 84.75 |
| TraesCS2B01G073500.1 | Wheat | cytosol | 85.59 | 84.52 |
| TraesCS2A01G057400.1 | Wheat | cytosol | 61.23 | 84.5 |
| HORVU2Hr1G009710.27 | Barley | cytosol | 72.25 | 81.58 |
| TraesCS2D01G072900.1 | Wheat | cytosol, mitochondrion, nucleus | 62.08 | 66.14 |
| TraesCS2D01G073000.2 | Wheat | mitochondrion | 50.42 | 58.19 |
| OQU78677 | Sorghum | cytosol | 29.87 | 45.19 |
| TraesCS2D01G073100.1 | Wheat | nucleus | 38.35 | 44.8 |
| Zm00001d023337_P010 | Maize | cytosol | 35.59 | 42.86 |
| KXG22925 | Sorghum | nucleus | 39.19 | 40.39 |
| KXG22929 | Sorghum | nucleus | 38.14 | 36.07 |
| EES15642 | Sorghum | mitochondrion, nucleus | 37.5 | 35.76 |
| Zm00001d023339_P001 | Maize | plastid | 34.32 | 33.54 |
| TraesCS7D01G264800.1 | Wheat | cytosol | 18.43 | 27.27 |
| TraesCS7D01G327300.1 | Wheat | cytosol | 13.98 | 23.24 |
| TraesCS7D01G327500.1 | Wheat | cytosol | 10.81 | 16.19 |
| TraesCS7D01G327200.1 | Wheat | nucleus | 13.98 | 14.6 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G056200.1 | EnsemblPlantsGene:TraesCS2D01G056200 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:+:22463890..22469154
Molecular Weight (calculated)
54032.3 Da
IEP (calculated)
4.255
GRAVY (calculated)
-0.573
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: MGINFKVKLY STDRAGSSGD GGAGPTPPPA PGLASSPSLD PAPVSASSLP LQPARQPPLT PIVKYTNEGP DVDDDWPEDE DDDWPEDEDD DEDEDQGLDD
101: DDDWLEDEDD EGWEVMQEDE VELPDEEKFY ISLFMSAQKK NLPHDLVRHH SVPLNKNEYF SLWENWNQLL DGKRTYLRPL KDCRILSVSG DFRCPDARPR
201: TLGCQEPLLD LVEDYPDNDI FQEIIKVLCQ RYLHFRRTRG DGNYFYRAFF FSYLENLGQM QDSQAEVTRL MEHVAVSREN FCRLKWDKAY FLNPEEYFSS
301: VVSELNHLVN SVANGLSSDE LYKRSLEEMM PLRIISLLRL LAETEIRTRE ADYKSFIPGN MNIHQYCYKE VRPLDVKPTM LAMRALTYAL GIPLRLEILG
401: RALMAGDLQV KRLDFFPRSE SGKGAFHMVQ SYWSSTSTPE LLELGSGNLL SSDGTPSLTL LCRSEDCDIL YR
101: DDDWLEDEDD EGWEVMQEDE VELPDEEKFY ISLFMSAQKK NLPHDLVRHH SVPLNKNEYF SLWENWNQLL DGKRTYLRPL KDCRILSVSG DFRCPDARPR
201: TLGCQEPLLD LVEDYPDNDI FQEIIKVLCQ RYLHFRRTRG DGNYFYRAFF FSYLENLGQM QDSQAEVTRL MEHVAVSREN FCRLKWDKAY FLNPEEYFSS
301: VVSELNHLVN SVANGLSSDE LYKRSLEEMM PLRIISLLRL LAETEIRTRE ADYKSFIPGN MNIHQYCYKE VRPLDVKPTM LAMRALTYAL GIPLRLEILG
401: RALMAGDLQV KRLDFFPRSE SGKGAFHMVQ SYWSSTSTPE LLELGSGNLL SSDGTPSLTL LCRSEDCDIL YR
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.