Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G089000.1 | Wheat | cytosol | 95.94 | 95.08 |
| TraesCS2A01G074000.1 | Wheat | cytosol | 90.52 | 91.55 |
| TraesCS2D01G056000.1 | Wheat | cytosol | 65.01 | 64.57 |
| TraesCS2D01G056200.1 | Wheat | cytosol | 66.14 | 62.08 |
| TraesCS2D01G073000.2 | Wheat | mitochondrion | 48.53 | 52.57 |
| TraesCS2D01G073100.1 | Wheat | nucleus | 35.21 | 38.61 |
| OQU78677 | Sorghum | cytosol | 27.09 | 38.46 |
| Zm00001d023337_P010 | Maize | cytosol | 32.73 | 36.99 |
| KXG22925 | Sorghum | nucleus | 36.57 | 35.37 |
| EES15642 | Sorghum | mitochondrion, nucleus | 34.31 | 30.71 |
| KXG22929 | Sorghum | nucleus | 34.54 | 30.66 |
| Zm00001d023339_P001 | Maize | plastid | 32.28 | 29.61 |
| TraesCS7D01G264800.1 | Wheat | cytosol | 14.45 | 20.06 |
| TraesCS7D01G327300.1 | Wheat | cytosol | 10.84 | 16.9 |
| TraesCS7D01G327200.1 | Wheat | nucleus | 11.74 | 11.5 |
| TraesCS7D01G327500.1 | Wheat | cytosol | 5.19 | 7.3 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G072900.1 | EnsemblPlantsGene:TraesCS2D01G072900 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:+:30547333..30551401
Molecular Weight (calculated)
50356.8 Da
IEP (calculated)
5.147
GRAVY (calculated)
-0.516
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTKFRFKVK LYKDRAGSSG DGGGGEPTPP PAPGPAPSPS LDPAALSASP LPLQPPPTPI VRYTYQGQDD DDDDWPEDDG TDLDAGQEDE DELPDDEKFY
101: IPLFMSGQKK NLPHDLFRHD SVPLNKNEYF SLWKNWNQLL DGKRTYLRPL RDRRVLSVSG VFRRPLARPW ALEFQEPLLD LVEDYPDNDI VQEMIKILCQ
201: RYVHFKRTRG DGSCFYRAFF FSYLENLGQM QDSQAEVTRL MEHVAVSREN FCRLKWDKAY FLNPEEYFSS VASELNHLVN SVANGLSSDE LQKRSLQEMM
301: PLRVISLLRL LAETEIRTRI DDYKPFIPGK VNVNQYCWKE VRPLDVKASA LAMRALTYAL GIPLRLETLG EGLTAGGLQV KRLDFFPRSE SGKGAFHIVR
401: SYWSSTTTPE PLEIGSGSLM SSDGTPLLTL LCRPDNCDIL YRK
101: IPLFMSGQKK NLPHDLFRHD SVPLNKNEYF SLWKNWNQLL DGKRTYLRPL RDRRVLSVSG VFRRPLARPW ALEFQEPLLD LVEDYPDNDI VQEMIKILCQ
201: RYVHFKRTRG DGSCFYRAFF FSYLENLGQM QDSQAEVTRL MEHVAVSREN FCRLKWDKAY FLNPEEYFSS VASELNHLVN SVANGLSSDE LQKRSLQEMM
301: PLRVISLLRL LAETEIRTRI DDYKPFIPGK VNVNQYCWKE VRPLDVKASA LAMRALTYAL GIPLRLETLG EGLTAGGLQV KRLDFFPRSE SGKGAFHIVR
401: SYWSSTTTPE PLEIGSGSLM SSDGTPLLTL LCRPDNCDIL YRK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.