Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G072900.1 | Wheat | cytosol, mitochondrion, nucleus | 91.55 | 90.52 |
| TraesCS2B01G089000.1 | Wheat | cytosol | 91.55 | 89.71 |
| TraesCS2A01G057400.1 | Wheat | cytosol | 44.29 | 56.73 |
| TraesCS2A01G074100.1 | Wheat | mitochondrion | 48.4 | 52.35 |
| OQU78677 | Sorghum | cytosol | 26.94 | 37.82 |
| Zm00001d023337_P010 | Maize | cytosol | 33.56 | 37.5 |
| TraesCS2A01G074500.1 | Wheat | nucleus | 32.65 | 36.48 |
| KXG22925 | Sorghum | nucleus | 36.3 | 34.72 |
| EES15642 | Sorghum | mitochondrion, nucleus | 34.02 | 30.1 |
| Zm00001d023339_P001 | Maize | plastid | 33.1 | 30.02 |
| KXG22929 | Sorghum | nucleus | 34.02 | 29.86 |
| TraesCS7A01G263900.1 | Wheat | cytosol | 14.38 | 19.75 |
| Os04t0652600-01 | Rice | nucleus | 17.81 | 14.23 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G074000.1 | EnsemblPlantsGene:TraesCS2A01G074000 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | PANTHER:PTHR12931 | PANTHER:PTHR12931:SF18 |
| PFAM:PF10275 | SEG:seg | SUPFAM:SSF54001 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:+:32527980..32532760
Molecular Weight (calculated)
49777.0 Da
IEP (calculated)
5.526
GRAVY (calculated)
-0.505
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIKFKVKLY KDRAGSSGDA AAAGGPTPPP APSPSHDPAA LPTSPHPRQP PPTAIFSYTY EGQDDDDDDW PEDDGTDLDA VQEDEDELPD DQKFYIPLFM
101: SGQKKNLPHG IVRHDSVPLN KNEYFSLWKN WNQLLDGKRT YLRPPRGRRV LSVSGVFRRP LARPWALEFQ EPLLDLVEDY PDNDTVQEMI KILCQRYVHF
201: KRTRGDGSCF YRAFFFSYLE NLGQIQDSQA EVTRLMEHVA VSRENFCRLK WDKAYFLNPE EYFSSVASEL NHLVNSVANG LSSDELQKRS LQEMMLLRVI
301: SFLRLLAETE IRTRIDDYNP FIPGKMNVNQ YCWKEVRPLD VKASALAMRA LTYALGIPLR LETLGEGLTA GGLQVKRLDF FPRSESGKGA FHIVRSYWSS
401: TTTPEPLEIG SGNLISSDGT PLLTLLCRPD NCDILYRK
101: SGQKKNLPHG IVRHDSVPLN KNEYFSLWKN WNQLLDGKRT YLRPPRGRRV LSVSGVFRRP LARPWALEFQ EPLLDLVEDY PDNDTVQEMI KILCQRYVHF
201: KRTRGDGSCF YRAFFFSYLE NLGQIQDSQA EVTRLMEHVA VSRENFCRLK WDKAYFLNPE EYFSSVASEL NHLVNSVANG LSSDELQKRS LQEMMLLRVI
301: SFLRLLAETE IRTRIDDYNP FIPGKMNVNQ YCWKEVRPLD VKASALAMRA LTYALGIPLR LETLGEGLTA GGLQVKRLDF FPRSESGKGA FHIVRSYWSS
401: TTTPEPLEIG SGNLISSDGT PLLTLLCRPD NCDILYRK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.