Factsheet for Os04t0652600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0537800-01	Rice	cytosol	13.14	33.33
TraesCS7D01G327300.1	Wheat	cytosol	14.42	27.82
OQU78677	Sorghum	cytosol	14.96	26.28
TraesCS2A01G074500.1	Wheat	nucleus	18.25	25.51
TraesCS2A01G074100.1	Wheat	mitochondrion	17.7	23.95
TraesCS7B01G231500.1	Wheat	cytosol	17.7	23.49
Zm00001d023337_P010	Maize	cytosol	16.06	22.45
HORVU7Hr1G079070.2	Barley	cytosol	17.7	22.25
KXG22925	Sorghum	nucleus	18.43	22.05
EES15642	Sorghum	mitochondrion, nucleus	18.07	20.0
KXG22929	Sorghum	nucleus	17.88	19.64
TraesCS7B01G157400.1	Wheat	cytosol	14.42	19.27
TraesCS7B01G231300.1	Wheat	nucleus	10.95	18.75
TraesCS7D01G327500.1	Wheat	cytosol	10.77	18.73
TraesCS2A01G057400.1	Wheat	cytosol	11.68	18.71
TraesCS7D01G327200.1	Wheat	nucleus	14.96	18.14
TraesCS2A01G074000.1	Wheat	cytosol	14.23	17.81
Zm00001d023339_P001	Maize	plastid	15.33	17.39
HORVU7Hr1G079150.11	Barley	cytosol, nucleus, plastid	7.3	14.76

Protein Annotations

Gene3D:1.20.1300.20	Gene3D:3.30.200.60	MapMan:35.1	EntrezGene:4337237	EMBL:AK107489	ProteinID:BAF16014.1
ProteinID:BAS91381.1	ProteinID:CAE03543.2	ProteinID:EAZ32233.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004843
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019784	GO:GO:0043130	GO:GO:0071108	EnsemblPlantsGene:Os04g0652600	EnsemblPlants:Os04t0652600-01	PFAM:PF10275
PANTHER:PTHR12931	PANTHER:PTHR12931:SF18	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C65_otubain	UniProt:Q7XPN5	SUPFAM:SSF54001
UniParc:UPI00001B1726	RefSeq:XP_015634208.1	SEG:seg	:	:	:

Description

Similar to OSIGBa0113E10.15 protein. (Os04t0652600-01)

Coordinates

chr4:+:33245194..33251252

Molecular Weight (calculated)

61636.1 Da

IEP (calculated)

4.384

GRAVY (calculated)

-0.815

Length

548 amino acids

Sequence
(BLAST)

001: MRRKPAASEG GWGSDADPDS GSSGNGGGGG SPPSSPSPPS PPSPQPLLPT LPSPQAFVDA YTGYEDQGAW DPDSLSLELG LATLRELECI RYQEAQEDWR
101: KSDDNKSDSC KQKDKDQGAW DPDSLSLELG LATLRELECI RYQEAQEDWR KSDDNKSDSC KQKDKEQEAW DPDSLSLELG LAPLQELEWI RYQEAQEDWR
201: RSDDNKSDSC KLRDKTTSDD RSKSGDNKYD SCKTRDKKPI VDLADEFENN TIKKKITLLS EKYDFFRPVD RDGSCFYRAF IFSYMERIVA MQDDLERIIE
301: VSRIGERIGK YKQAYARFGS FGIPQEEFLK ALSAFEQLIN LIEKGVAVEQ LYQIDETDIT KNSLRFLRFL TEIEICTHED HYKGFLLTAD YSSVFEFCQV
401: EVRPENAEAS NEQMKALVEA LGIPVLVENL DTTSETDTPI LNQHFIYPRP ESEEGTMLGP LNSHEIVSPE SSGYHAARGE LQNQPSTSGS STNSSTEALG
501: LQSIGTSSTP NERDGKGDRT INDLSPAERR RLAILLYRPG HYDILCPK

Best Arabidopsis Sequence Match ( AT1G28120.1 )
(BLAST)

001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK

Arabidopsis Description

Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.