CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22929	Sorghum	nucleus	71.15	44.49
Zm00001d023339_P001	Maize	plastid	61.86	39.96
TraesCS2B01G089100.1	Wheat	nucleus	38.14	39.53
KXG22925	Sorghum	nucleus	56.41	38.43
EES15642	Sorghum	mitochondrion, nucleus	59.94	37.78
TraesCS2A01G074100.1	Wheat	mitochondrion	45.19	34.81
TraesCS2D01G073000.2	Wheat	mitochondrion	45.51	34.72
HORVU2Hr1G009710.27	Barley	cytosol	45.51	33.97
TraesCS2D01G056000.1	Wheat	cytosol	44.87	31.39
TraesCS2B01G089800.1	Wheat	nucleus	40.38	29.93
TraesCS2D01G056200.1	Wheat	cytosol	45.19	29.87
TraesCS2D01G073100.1	Wheat	nucleus	38.46	29.7
TraesCS2A01G074500.1	Wheat	nucleus	37.18	29.59
TraesCS2B01G078500.1	Wheat	nucleus	38.14	29.38
TraesCS2B01G073500.1	Wheat	cytosol	44.87	29.29
TraesCS2B01G089600.1	Wheat	nucleus	37.82	29.28
TraesCS2A01G057400.1	Wheat	cytosol	32.05	29.24
TraesCS2D01G072900.1	Wheat	cytosol, mitochondrion, nucleus	38.46	27.09
TraesCS2B01G089000.1	Wheat	cytosol	38.78	27.07
TraesCS2A01G074000.1	Wheat	cytosol	37.82	26.94
HORVU2Hr1G012520.2	Barley	cytosol, nucleus	36.22	26.16
HORVU2Hr1G012540.44	Barley	cytosol	33.97	25.18
EES15282	Sorghum	cytosol	22.12	21.3
Os04t0652600-01	Rice	nucleus	26.28	14.96

Protein Annotations

EnsemblPlants:OQU78677	EnsemblPlantsGene:SORBI_3008G029850	Gene3D:1.20.1300.20	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C65_otubain	PANTHER:PTHR12931
PANTHER:PTHR12931:SF18	PFAM:PF10275	ProteinID:OQU78677	ProteinID:OQU78677.1	SEG:seg	SUPFAM:SSF54001
UniParc:UPI000B8BB062	UniProt:A0A1Z5R4K9	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:2657527..2660856

Molecular Weight (calculated)

35341.5 Da

IEP (calculated)

9.380

GRAVY (calculated)

-0.279

Length

312 amino acids

Sequence
(BLAST)

001: MTYPRNPPHY IGRQNCEPLT RQKFLSLHHN WQQLLDGKNT YLRPPKNNRS AGAPSSLKAS LDVLDILSEY YACFRPMRRD GSQFYRAFLF SYLENLGKMQ
101: GSQAEVTRLM ECVARSRVNF LRLEWNNAYF SNPEAFFSSV VSEFEHLVNS VANGLNADEL YKISLQEISS SRILSLLRLL TEVQIRTYEA HYNREQSQNQ
201: NEKINALLFC KESVRPFGAD VISLQMMALP QALGIPLHLA AVDGTVNDGP VQVKCIDIIP RSGPLSSSRK YYLSSATDKP PVLPAGNLFL SDRMPLVILL
301: KSSNGTAILY RK

Best Arabidopsis Sequence Match ( AT1G28120.1 )
(BLAST)

001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK

Arabidopsis Description

Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.