Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G28120.1 | EER91078 | AT5G42990.1 | 21798944 |
| AT1G28120.1 | EES17494 | AT5G42990.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049873_P001 | Maize | cytosol, extracellular | 89.51 | 91.19 |
| Os08t0537800-01 | Rice | cytosol | 57.72 | 86.57 |
| GSMUA_Achr5P21640_001 | Banana | cytosol | 25.0 | 79.41 |
| HORVU7Hr1G055280.2 | Barley | cytosol | 76.85 | 78.06 |
| TraesCS7B01G161900.2 | Wheat | cytosol | 76.54 | 77.74 |
| TraesCS7D01G264800.1 | Wheat | cytosol | 76.23 | 77.43 |
| TraesCS7A01G263900.1 | Wheat | cytosol | 75.93 | 77.12 |
| Zm00001d031668_P001 | Maize | cytosol | 26.54 | 76.11 |
| PGSC0003DMT400017149 | Potato | cytosol | 26.23 | 71.43 |
| GSMUA_Achr5P21620_001 | Banana | cytosol | 36.11 | 65.0 |
| CDX90125 | Canola | cytosol | 56.48 | 61.2 |
| KRH10721 | Soybean | nucleus | 55.56 | 59.8 |
| KRH21599 | Soybean | cytosol | 55.25 | 59.47 |
| CDY11749 | Canola | cytosol | 54.94 | 59.33 |
| VIT_01s0150g00100.t01 | Wine grape | cytosol | 55.56 | 59.02 |
| CDY15693 | Canola | cytosol | 36.42 | 59.0 |
| AT1G28120.1 | Thale cress | cytosol | 55.56 | 58.82 |
| Solyc04g045480.2.1 | Tomato | cytosol | 54.63 | 58.8 |
| CDY66647 | Canola | cytosol | 50.93 | 58.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.06 | 58.17 |
| Bra030073.1-P | Field mustard | extracellular | 35.19 | 57.0 |
| Bra010902.1-P | Field mustard | cytosol | 54.01 | 55.2 |
| GSMUA_Achr11P... | Banana | cytosol | 45.37 | 45.37 |
| PGSC0003DMT400017147 | Potato | cytosol | 23.46 | 44.44 |
| OQU78677 | Sorghum | cytosol | 21.3 | 22.12 |
| KXG22925 | Sorghum | nucleus | 25.31 | 17.9 |
| EES15642 | Sorghum | mitochondrion, nucleus | 25.31 | 16.57 |
| KXG22929 | Sorghum | nucleus | 25.0 | 16.23 |
Protein Annotations
| Gene3D:1.20.1300.20 | MapMan:19.2.3.1.2.1 | MapMan:19.2.4.3.3 | Gene3D:3.30.200.60 | UniProt:C5YHM5 | EnsemblPlants:EES15282 |
| ProteinID:EES15282 | ProteinID:EES15282.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004843 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009987 |
| GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019784 | GO:GO:0036459 | GO:GO:0043130 |
| GO:GO:0071108 | InterPro:IPR003323 | ProteinID:OQU80811.1 | InterPro:OTU_dom | InterPro:Otubain | PFAM:PF10275 |
| PIRSF:PIRSF013503 | PFscan:PS50802 | PANTHER:PTHR12931 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C65_otubain | EnsemblPlantsGene:SORBI_3007G189000 |
| SUPFAM:SSF54001 | UniParc:UPI00081AE191 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:62168848..62174483
Molecular Weight (calculated)
35539.9 Da
IEP (calculated)
4.256
GRAVY (calculated)
-0.253
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDVPQAPHA AEGGGGGLEE GAVPDPNPSP SLSLGGCSDP VSLELSMGGD YYRACCGDPD PDIPEGPKLP CVGEKEPLSS LAAEFQSGSP ILQEKIKLLG
101: EQYGALRRTR GDGNCFYRSF MFSYLEHILE TQDKAEADRI MVKIEDCKKT LLSLGYIEFT FEDFFAIFID MLESVLQGHE TPIGPEELLE RTRDPQVSDC
201: VVMFFRFVTS GEIQRRSDFF EPFISGLTNS TVVQFCKASV EPMGEESDHV HIIALSDALG VPIRVMYLDR SSCDTGNLSV NHHDFIPSSN ASEGDAAMTS
301: TPDAEKPYIT LLYRPGHYDI LYPK
101: EQYGALRRTR GDGNCFYRSF MFSYLEHILE TQDKAEADRI MVKIEDCKKT LLSLGYIEFT FEDFFAIFID MLESVLQGHE TPIGPEELLE RTRDPQVSDC
201: VVMFFRFVTS GEIQRRSDFF EPFISGLTNS TVVQFCKASV EPMGEESDHV HIIALSDALG VPIRVMYLDR SSCDTGNLSV NHHDFIPSSN ASEGDAAMTS
301: TPDAEKPYIT LLYRPGHYDI LYPK
001: MQNQIDMVKD EAEVAASISA IKGEEWGNCS SVEDQPSFQE EEAAKVPYVG DKEPLSSLAA EYQSGSPILL EKIKILDSQY IGIRRTRGDG NCFFRSFMFS
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
101: YLEHILESQD RAEVDRIKVN VEKCRKTLQN LGYTDFTFED FFALFLEQLD DILQGTEESI SYDELVNRSR DQSVSDYIVM FFRFVTAGDI RTRADFFEPF
201: ITGLSNATVD QFCKSSVEPM GEESDHIHIT ALSDALGVAI RVVYLDRSSC DSGGVTVNHH DFVPVGITNE KDEEASAPFI TLLYRPGHYD ILYPKPSCKV
301: SDNVGK
Arabidopsis Description
Ubiquitin thioesterase [Source:UniProtKB/TrEMBL;Acc:K9M9G0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.