CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES19487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42990.1	EES19487	AT5G19080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041216_P001	Maize	extracellular	98.76	98.76
TraesCS5D01G006000.1	Wheat	cytosol	95.65	95.65
TraesCS5B01G005100.1	Wheat	cytosol	95.65	95.65
TraesCS5A01G006200.1	Wheat	cytosol	95.65	95.65
Os12t0636800-01	Rice	cytosol	95.65	95.65
GSMUA_Achr9P25520_001	Banana	cytosol, mitochondrion, nucleus, plastid	90.68	90.68
GSMUA_Achr4P20980_001	Banana	cytosol, mitochondrion, nucleus, plastid	90.68	90.68
GSMUA_Achr9P10780_001	Banana	cytosol	90.06	90.06
GSMUA_Achr6P29810_001	Banana	cytosol	89.44	89.44
EER91078	Sorghum	cytosol, plastid	91.3	89.09
AT5G42990.1	Thale cress	cytosol	88.2	88.2
AT1G45050.1	Thale cress	cytosol	88.2	88.2
Solyc02g084760.2.1	Tomato	plastid	86.96	86.96
KRH28745	Soybean	nucleus	86.96	86.96
KRH76710	Soybean	nucleus	86.96	86.96
PGSC0003DMT400009304	Potato	nucleus	86.96	86.96
Bra036332.1-P	Field mustard	cytosol, mitochondrion, nucleus	65.84	86.89
Solyc04g080810.2.1	Tomato	mitochondrion, nucleus	86.34	86.34
PGSC0003DMT400009620	Potato	nucleus	86.34	86.34
CDY12582	Canola	cytosol	84.47	84.47
HORVU0Hr1G000080.1	Barley	extracellular	39.13	84.0
CDY47951	Canola	cytosol	83.85	83.85
CDY25658	Canola	cytosol	86.96	82.84
CDY32969	Canola	plastid	88.82	82.18
Bra027470.1-P	Field mustard	plastid	88.82	82.18
Zm00001d031205_P004	Maize	cytosol	81.99	77.19
CDY43850	Canola	nucleus	86.96	66.35
Bra032210.1-P	Field mustard	nucleus	77.02	65.61
VIT_09s0002g07740.t01	Wine grape	cytosol	32.3	63.41
VIT_09s0002g07790.t01	Wine grape	cytosol	30.43	59.76
CDY43593	Canola	cytosol	80.75	57.78

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	EntrezGene:8065249	UniProt:C5YT12	EnsemblPlants:EES17494	ProteinID:EES17494
ProteinID:EES17494.1	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538
GO:GO:0031625	GO:GO:0043161	GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135	PFAM:PF00179
PFscan:PS50127	PANTHER:PTHR44452	PANTHER:PTHR44452:SF3	SMART:SM00212	EnsemblPlantsGene:SORBI_3008G189300	SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0001A88B9D	RefSeq:XP_002443656.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:62352883..62357437

Molecular Weight (calculated)

18234.6 Da

IEP (calculated)

7.986

GRAVY (calculated)

-0.466

Length

161 amino acids

Sequence
(BLAST)

001: MTSSSSPSRK ALSKIACNRL QKELAEWQLN PPAGFKHKVS DNLQRWVIEV TGAAGTLYAG ETYQLQVDFP EHYPMEAPQV IFLNPAPMHP HIYSNGHICL
101: DILYDSWSPA MTVSSVCISI LSMLSSSPAK QRPADNDRYV RNCRNGRSPK ETRWWFHDDT V

Best Arabidopsis Sequence Match ( AT1G45050.1 )
(BLAST)

001: MTSSSAPSRK ALSKIACNRL QKELSEWQLN PPTGFRHKVT DNLQKWTIDV TGAPGTLYAN ETYQLQVEFP EHYPMEAPQV VFVSPAPSHP HIYSNGHICL
101: DILYDSWSPA MTVNSVCISI LSMLSSSPAK QRPADNDRYV KNCKNGRSPK ETRWWFHDDK V

Arabidopsis Description

UBC15Ubiquitin-conjugating enzyme 15 [Source:UniProtKB/Swiss-Prot;Acc:P42743]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.