Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036332.1-P | Field mustard | cytosol, mitochondrion, nucleus | 70.19 | 92.62 |
| AT5G42990.1 | Thale cress | cytosol | 91.3 | 91.3 |
| CDY12582 | Canola | cytosol | 91.3 | 91.3 |
| CDY47951 | Canola | cytosol | 90.68 | 90.68 |
| CDY25658 | Canola | cytosol | 95.03 | 90.53 |
| Zm00001d033374_P001 | Maize | endoplasmic reticulum, extracellular, nucleus, plastid | 27.95 | 88.24 |
| EES17494 | Sorghum | cytosol | 88.2 | 88.2 |
| Os03t0681400-01 | Rice | cytosol | 87.58 | 87.58 |
| Zm00001d041216_P001 | Maize | extracellular | 86.96 | 86.96 |
| TraesCS5D01G006000.1 | Wheat | cytosol | 86.34 | 86.34 |
| TraesCS5B01G005100.1 | Wheat | cytosol | 86.34 | 86.34 |
| TraesCS5A01G006200.1 | Wheat | cytosol | 86.34 | 86.34 |
| AT1G75440.1 | Thale cress | nucleus | 85.71 | 85.71 |
| Os12t0636800-01 | Rice | cytosol | 85.71 | 85.71 |
| EER91078 | Sorghum | cytosol, plastid | 83.85 | 81.82 |
| TraesCS4A01G288800.1 | Wheat | cytosol | 63.98 | 81.75 |
| HORVU0Hr1G000080.1 | Barley | extracellular | 37.27 | 80.0 |
| TraesCS4D01G023400.1 | Wheat | cytosol, mitochondrion | 80.75 | 79.75 |
| HORVU4Hr1G003890.1 | Barley | cytosol, mitochondrion | 80.75 | 79.75 |
| AT4G36410.1 | Thale cress | nucleus | 77.64 | 77.64 |
| TraesCS4B01G026000.2 | Wheat | cytosol | 80.75 | 74.29 |
| CDY43850 | Canola | nucleus | 94.41 | 72.04 |
| Bra032210.1-P | Field mustard | nucleus | 83.23 | 70.9 |
| Zm00001d031205_P004 | Maize | cytosol | 72.67 | 68.42 |
| VIT_09s0002g07740.t01 | Wine grape | cytosol | 32.3 | 63.41 |
| Zm00001d013546_P003 | Maize | mitochondrion, plastid | 82.61 | 63.33 |
| VIT_09s0002g07790.t01 | Wine grape | cytosol | 31.06 | 60.98 |
Protein Annotations
| Gene3D:3.10.110.10 | MapMan:35.1 | EntrezGene:841072 | ProteinID:AAC39324.1 | ProteinID:AAF69157.1 | ProteinID:AEE32077.1 |
| EMBL:AK176757 | ArrayExpress:AT1G45050 | EnsemblPlantsGene:AT1G45050 | RefSeq:AT1G45050 | TAIR:AT1G45050 | RefSeq:AT1G45050-TAIR-G |
| EnsemblPlants:AT1G45050.1 | TAIR:AT1G45050.1 | Symbol:ATUBC2-1 | EMBL:BT026105 | EMBL:DQ027029 | GO:GO:0000166 |
| GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 | GO:GO:0043161 | GO:GO:0061630 |
| InterPro:IPR000608 | InterPro:IPR016135 | RefSeq:NP_564493.1 | UniProt:P42743 | PFAM:PF00179 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR44452 | PANTHER:PTHR44452:SF1 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0000137978 |
| EMBL:X68306 | : | : | : | : | : |
Description
UBC15Ubiquitin-conjugating enzyme 15 [Source:UniProtKB/Swiss-Prot;Acc:P42743]
Coordinates
chr1:+:17031211..17033269
Molecular Weight (calculated)
18262.6 Da
IEP (calculated)
8.327
GRAVY (calculated)
-0.581
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSSAPSRK ALSKIACNRL QKELSEWQLN PPTGFRHKVT DNLQKWTIDV TGAPGTLYAN ETYQLQVEFP EHYPMEAPQV VFVSPAPSHP HIYSNGHICL
101: DILYDSWSPA MTVNSVCISI LSMLSSSPAK QRPADNDRYV KNCKNGRSPK ETRWWFHDDK V
101: DILYDSWSPA MTVNSVCISI LSMLSSSPAK QRPADNDRYV KNCKNGRSPK ETRWWFHDDK V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.