CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G45050.1	Thale cress	cytosol	90.53	95.03
CDY12582	Canola	cytosol	89.94	94.41
CDY47951	Canola	cytosol	89.35	93.79
EES17494	Sorghum	cytosol	82.84	86.96
Os03t0681400-01	Rice	cytosol	82.25	86.34
Zm00001d033374_P001	Maize	endoplasmic reticulum, extracellular, nucleus, plastid	26.04	86.27
Zm00001d041216_P001	Maize	extracellular	81.66	85.71
TraesCS5B01G005100.1	Wheat	cytosol	81.07	85.09
CDY47522	Canola	nucleus	81.07	85.09
TraesCS5A01G006200.1	Wheat	cytosol	81.07	85.09
TraesCS5D01G006000.1	Wheat	cytosol	81.07	85.09
CDY32969	Canola	plastid	86.98	84.48
Os12t0636800-01	Rice	cytosol	80.47	84.47
CDX73173	Canola	cytosol	79.88	83.85
TraesCS4A01G288800.1	Wheat	cytosol	61.54	82.54
EER91078	Sorghum	cytosol, plastid	78.7	80.61
TraesCS4D01G023400.1	Wheat	cytosol, mitochondrion	77.51	80.37
HORVU4Hr1G003890.1	Barley	cytosol, mitochondrion	77.51	80.37
CDY43850	Canola	nucleus	99.41	79.62
HORVU0Hr1G000080.1	Barley	extracellular	34.91	78.67
CDX75572	Canola	nucleus	73.96	77.64
CDY64924	Canola	cytosol	73.37	77.02
CDX69222	Canola	nucleus	73.37	77.02
CDY59697	Canola	nucleus	72.19	75.78
TraesCS4B01G026000.2	Wheat	cytosol	77.51	74.86
Bra032210.1-P	Field mustard	nucleus	82.84	74.07
Zm00001d031205_P004	Maize	cytosol	68.64	67.84
VIT_09s0002g07740.t01	Wine grape	cytosol	30.77	63.41
Zm00001d013546_P003	Maize	mitochondrion, plastid	78.11	62.86
VIT_09s0002g07790.t01	Wine grape	cytosol	29.59	60.98
CDY43593	Canola	cytosol	80.47	60.44

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	GO:A0A078GM22	UniProt:A0A078GM22	EnsemblPlants:CDY25658	ProteinID:CDY25658
ProteinID:CDY25658.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00032965001	InterPro:IPR000608	InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183
PFscan:PS50127	PANTHER:PTHR44452	PANTHER:PTHR44452:SF1	MetaCyc:PWY-7511	SMART:SM00212	SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniPathway:UPA00143	UniParc:UPI0004EDF5E6	:

Description

BnaC05g25370DBnaC05g25370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM22]

Coordinates

chrLK032178:+:138283..140097

Molecular Weight (calculated)

19056.7 Da

IEP (calculated)

7.823

GRAVY (calculated)

-0.409

Length

169 amino acids

Sequence
(BLAST)

001: MTSSSAPSRK ALSKIACNRL QKELTEWQLN PPTGFRHKVT DNLQKWTIDV TGAPGTLYAN ETYQLQVEFP VNYPMEAPQA CVCLMELVIF VPPAPSHPHI
101: YSNGHICLDI LYDSWSPAMT VSSVCISILS MLSSSPAKER PADNDRYVKN CKNGRSPKET RWWFHDDKA

Best Arabidopsis Sequence Match ( AT1G45050.1 )
(BLAST)

001: MTSSSAPSRK ALSKIACNRL QKELSEWQLN PPTGFRHKVT DNLQKWTIDV TGAPGTLYAN ETYQLQVEFP EHYPMEAPQV VFVSPAPSHP HIYSNGHICL
101: DILYDSWSPA MTVNSVCISI LSMLSSSPAK QRPADNDRYV KNCKNGRSPK ETRWWFHDDK V

Arabidopsis Description

UBC15Ubiquitin-conjugating enzyme 15 [Source:UniProtKB/Swiss-Prot;Acc:P42743]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.